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A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition

Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery,...

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Detalles Bibliográficos
Autores principales: Gachloo, Mina, Wang, Yuxing, Xia, Jingbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6808632/
https://www.ncbi.nlm.nih.gov/pubmed/31307133
http://dx.doi.org/10.5808/GI.2019.17.2.e18
Descripción
Sumario:Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery, which provides a sophisticated comprehension of the relationship among drugs, targets, diseases, and targeted genes, at the molecular level, or relationships among drugs, usage, side effect, safety, and user preference, at a social level. In this research, previous work from the BioNLP community and matrix or tensor decomposition was reviewed, compared, and concluded, and eventually, the BioNLP open-shared task was introduced as a promising case study representing this area.