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A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery,...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korea Genome Organization
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6808632/ https://www.ncbi.nlm.nih.gov/pubmed/31307133 http://dx.doi.org/10.5808/GI.2019.17.2.e18 |
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author | Gachloo, Mina Wang, Yuxing Xia, Jingbo |
author_facet | Gachloo, Mina Wang, Yuxing Xia, Jingbo |
author_sort | Gachloo, Mina |
collection | PubMed |
description | Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery, which provides a sophisticated comprehension of the relationship among drugs, targets, diseases, and targeted genes, at the molecular level, or relationships among drugs, usage, side effect, safety, and user preference, at a social level. In this research, previous work from the BioNLP community and matrix or tensor decomposition was reviewed, compared, and concluded, and eventually, the BioNLP open-shared task was introduced as a promising case study representing this area. |
format | Online Article Text |
id | pubmed-6808632 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Korea Genome Organization |
record_format | MEDLINE/PubMed |
spelling | pubmed-68086322019-10-30 A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition Gachloo, Mina Wang, Yuxing Xia, Jingbo Genomics Inform Mini Review Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery, which provides a sophisticated comprehension of the relationship among drugs, targets, diseases, and targeted genes, at the molecular level, or relationships among drugs, usage, side effect, safety, and user preference, at a social level. In this research, previous work from the BioNLP community and matrix or tensor decomposition was reviewed, compared, and concluded, and eventually, the BioNLP open-shared task was introduced as a promising case study representing this area. Korea Genome Organization 2019-06-27 /pmc/articles/PMC6808632/ /pubmed/31307133 http://dx.doi.org/10.5808/GI.2019.17.2.e18 Text en (c) 2019, Korea Genome Organization (CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mini Review Gachloo, Mina Wang, Yuxing Xia, Jingbo A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
title | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
title_full | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
title_fullStr | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
title_full_unstemmed | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
title_short | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
title_sort | review of drug knowledge discovery using bionlp and tensor or matrix decomposition |
topic | Mini Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6808632/ https://www.ncbi.nlm.nih.gov/pubmed/31307133 http://dx.doi.org/10.5808/GI.2019.17.2.e18 |
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