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A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition

Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery,...

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Detalles Bibliográficos
Autores principales: Gachloo, Mina, Wang, Yuxing, Xia, Jingbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6808632/
https://www.ncbi.nlm.nih.gov/pubmed/31307133
http://dx.doi.org/10.5808/GI.2019.17.2.e18
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author Gachloo, Mina
Wang, Yuxing
Xia, Jingbo
author_facet Gachloo, Mina
Wang, Yuxing
Xia, Jingbo
author_sort Gachloo, Mina
collection PubMed
description Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery, which provides a sophisticated comprehension of the relationship among drugs, targets, diseases, and targeted genes, at the molecular level, or relationships among drugs, usage, side effect, safety, and user preference, at a social level. In this research, previous work from the BioNLP community and matrix or tensor decomposition was reviewed, compared, and concluded, and eventually, the BioNLP open-shared task was introduced as a promising case study representing this area.
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spelling pubmed-68086322019-10-30 A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition Gachloo, Mina Wang, Yuxing Xia, Jingbo Genomics Inform Mini Review Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery, which provides a sophisticated comprehension of the relationship among drugs, targets, diseases, and targeted genes, at the molecular level, or relationships among drugs, usage, side effect, safety, and user preference, at a social level. In this research, previous work from the BioNLP community and matrix or tensor decomposition was reviewed, compared, and concluded, and eventually, the BioNLP open-shared task was introduced as a promising case study representing this area. Korea Genome Organization 2019-06-27 /pmc/articles/PMC6808632/ /pubmed/31307133 http://dx.doi.org/10.5808/GI.2019.17.2.e18 Text en (c) 2019, Korea Genome Organization (CC) This is an open-access article distributed under the terms of the Creative Commons Attribution license(https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mini Review
Gachloo, Mina
Wang, Yuxing
Xia, Jingbo
A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
title A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
title_full A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
title_fullStr A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
title_full_unstemmed A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
title_short A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
title_sort review of drug knowledge discovery using bionlp and tensor or matrix decomposition
topic Mini Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6808632/
https://www.ncbi.nlm.nih.gov/pubmed/31307133
http://dx.doi.org/10.5808/GI.2019.17.2.e18
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