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2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults

BACKGROUND: Native Americans experience a high burden of community-acquired pneumonia (CAP). Thirteen-valent pneumococcal conjugate vaccine (PCV13) was introduced for adults ≥65yrs in 2014. Data on CAP etiology can guide prevention and treatment. METHODS: We enrolled adults hospitalized with CAP and...

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Autores principales: Hammitt, Laura, Driscoll, Amanda, Weatherholtz, Robert, Reid, Raymond, Colelay, Janene, Grant, Lindsay, VanDeRiet, Daniel, Alexander-Parrish, Ronika, Pride, Michael W, McLaughlin, John M, Gessner, Bradford D, Isturiz, Raul E, Santosham, Mathuram, O’Brien, Katherine
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6809528/
http://dx.doi.org/10.1093/ofid/ofz360.1891
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author Hammitt, Laura
Driscoll, Amanda
Weatherholtz, Robert
Reid, Raymond
Colelay, Janene
Grant, Lindsay
VanDeRiet, Daniel
Alexander-Parrish, Ronika
Pride, Michael W
McLaughlin, John M
Gessner, Bradford D
Isturiz, Raul E
Santosham, Mathuram
O’Brien, Katherine
author_facet Hammitt, Laura
Driscoll, Amanda
Weatherholtz, Robert
Reid, Raymond
Colelay, Janene
Grant, Lindsay
VanDeRiet, Daniel
Alexander-Parrish, Ronika
Pride, Michael W
McLaughlin, John M
Gessner, Bradford D
Isturiz, Raul E
Santosham, Mathuram
O’Brien, Katherine
author_sort Hammitt, Laura
collection PubMed
description BACKGROUND: Native Americans experience a high burden of community-acquired pneumonia (CAP). Thirteen-valent pneumococcal conjugate vaccine (PCV13) was introduced for adults ≥65yrs in 2014. Data on CAP etiology can guide prevention and treatment. METHODS: We enrolled adults hospitalized with CAP and age-group-matched non-hospitalized controls on Navajo and White Mountain Apache tribal lands. Nasopharyngeal/oropharyngeal (NP/OP) swabs from cases and controls were tested by multiplex PCR for respiratory pathogens. Urine from cases and controls was tested for pneumococcus (Sp) by conventional (BinaxNOW) and serotype-specific urine antigen detection (UAD) for 24 serotypes (PCV13 types plus 2, 8, 9N, 10A, 11A, 12F, 15B, 17F, 20, 22F, 33F). Blood culture and chest radiographs (CXRs) were obtained from cases at the provider’s discretion. Radiographic pneumonia was determined by clinical interpretation of CXRs. RESULTS: From March 2016 to March 2018, we enrolled 580 CAP cases with CXR confirmation and 411 controls. Positive blood culture was identified in 42/483 (9%), of which 29 (69%) were Sp. Sp was detected in 164/572 (29%) cases (table). Of 125 cases with serotype information available, serotypes 3 (n = 35; 28%) 8 (n = 19; 15%) and 20 (n = 15; 12%) were the most common. Among 53 Sp cases aged ≥65 years, 26 (49%) were PCV13-type. Compared with blood culture, UAD was 100% sensitive and 100% concordant (n = 24). Viruses were detected by NP/OP PCR in 43% of CAP cases and 18% of controls. Influenza A, parainfluenza type 3, rhinovirus, and RSV were statistically significantly associated with case status. Among 263 cases in whom all diagnostic tests were collected, 63% had a pathogen detected: bacteria alone in 19%, viruses alone in 23%, and both bacterial and viral infection in 22%. Bacterial causes outnumbered viral causes when adjusting for virus detection in the control population. CONCLUSION: Pneumococci were the most common etiology identified among Native American adults with CAP. UAD improved detection of pneumococcal CAP. Respiratory viruses also contributed substantially to CAP burden. Broader prevention strategies, including new vaccines, are required to prevent viral pneumonia and pneumococcal pneumonia caused by serotypes not contained in currently-available vaccines. [Image: see text] DISCLOSURES: All authors: No reported disclosures.
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spelling pubmed-68095282019-10-28 2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults Hammitt, Laura Driscoll, Amanda Weatherholtz, Robert Reid, Raymond Colelay, Janene Grant, Lindsay VanDeRiet, Daniel Alexander-Parrish, Ronika Pride, Michael W McLaughlin, John M Gessner, Bradford D Isturiz, Raul E Santosham, Mathuram O’Brien, Katherine Open Forum Infect Dis Abstracts BACKGROUND: Native Americans experience a high burden of community-acquired pneumonia (CAP). Thirteen-valent pneumococcal conjugate vaccine (PCV13) was introduced for adults ≥65yrs in 2014. Data on CAP etiology can guide prevention and treatment. METHODS: We enrolled adults hospitalized with CAP and age-group-matched non-hospitalized controls on Navajo and White Mountain Apache tribal lands. Nasopharyngeal/oropharyngeal (NP/OP) swabs from cases and controls were tested by multiplex PCR for respiratory pathogens. Urine from cases and controls was tested for pneumococcus (Sp) by conventional (BinaxNOW) and serotype-specific urine antigen detection (UAD) for 24 serotypes (PCV13 types plus 2, 8, 9N, 10A, 11A, 12F, 15B, 17F, 20, 22F, 33F). Blood culture and chest radiographs (CXRs) were obtained from cases at the provider’s discretion. Radiographic pneumonia was determined by clinical interpretation of CXRs. RESULTS: From March 2016 to March 2018, we enrolled 580 CAP cases with CXR confirmation and 411 controls. Positive blood culture was identified in 42/483 (9%), of which 29 (69%) were Sp. Sp was detected in 164/572 (29%) cases (table). Of 125 cases with serotype information available, serotypes 3 (n = 35; 28%) 8 (n = 19; 15%) and 20 (n = 15; 12%) were the most common. Among 53 Sp cases aged ≥65 years, 26 (49%) were PCV13-type. Compared with blood culture, UAD was 100% sensitive and 100% concordant (n = 24). Viruses were detected by NP/OP PCR in 43% of CAP cases and 18% of controls. Influenza A, parainfluenza type 3, rhinovirus, and RSV were statistically significantly associated with case status. Among 263 cases in whom all diagnostic tests were collected, 63% had a pathogen detected: bacteria alone in 19%, viruses alone in 23%, and both bacterial and viral infection in 22%. Bacterial causes outnumbered viral causes when adjusting for virus detection in the control population. CONCLUSION: Pneumococci were the most common etiology identified among Native American adults with CAP. UAD improved detection of pneumococcal CAP. Respiratory viruses also contributed substantially to CAP burden. Broader prevention strategies, including new vaccines, are required to prevent viral pneumonia and pneumococcal pneumonia caused by serotypes not contained in currently-available vaccines. [Image: see text] DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2019-10-23 /pmc/articles/PMC6809528/ http://dx.doi.org/10.1093/ofid/ofz360.1891 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Abstracts
Hammitt, Laura
Driscoll, Amanda
Weatherholtz, Robert
Reid, Raymond
Colelay, Janene
Grant, Lindsay
VanDeRiet, Daniel
Alexander-Parrish, Ronika
Pride, Michael W
McLaughlin, John M
Gessner, Bradford D
Isturiz, Raul E
Santosham, Mathuram
O’Brien, Katherine
2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults
title 2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults
title_full 2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults
title_fullStr 2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults
title_full_unstemmed 2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults
title_short 2213. Etiology of Community-Acquired Pneumonia (CAP) in Hospitalized Native American Adults
title_sort 2213. etiology of community-acquired pneumonia (cap) in hospitalized native american adults
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6809528/
http://dx.doi.org/10.1093/ofid/ofz360.1891
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