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1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections

BACKGROUND: Providers use institutional recommendations, national guidelines, and antibiograms to decide on empiric antibiotics. As local antibiograms are most effective after organisms are known, we sought to use local microbiology and clinical data to develop predictive models for antibiotic cover...

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Autores principales: Hebert, Courtney, Gao, Yuan, Rahman, Protiva, Dewart, Courtney M, Shah, Nirav, Lustberg, Mark, Stevenson, Kurt, Pancholi, Preeti, Hade, Erinn
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6809692/
http://dx.doi.org/10.1093/ofid/ofz360.1297
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author Hebert, Courtney
Gao, Yuan
Rahman, Protiva
Dewart, Courtney M
Shah, Nirav
Lustberg, Mark
Stevenson, Kurt
Pancholi, Preeti
Hade, Erinn
author_facet Hebert, Courtney
Gao, Yuan
Rahman, Protiva
Dewart, Courtney M
Shah, Nirav
Lustberg, Mark
Stevenson, Kurt
Pancholi, Preeti
Hade, Erinn
author_sort Hebert, Courtney
collection PubMed
description BACKGROUND: Providers use institutional recommendations, national guidelines, and antibiograms to decide on empiric antibiotics. As local antibiograms are most effective after organisms are known, we sought to use local microbiology and clinical data to develop predictive models for antibiotic coverage prior to identifying the organism. We focused on Gram-negative organisms as they are common urinary pathogens and are often the cause of sepsis originating in the urinary tract. As such, they are important to cover in hospitalized patients with urinary tract infections (UTI). METHODS: Hospitalized patients, with a diagnosis of UTI and a positive urine culture in the first 48 hours were included. Gram-positive organisms, yeast, and cultures without susceptibilities were excluded. Unknown susceptibilities were filled in using expert-derived rules. Clinical information from electronic health record (EHR) data were extracted on each patient. Penalized logistic regression with 10-fold cross validation was used to develop final models for coverage for five antibiotics (cefazolin, ceftriaxone, ciprofloxacin, cefepime, piperacillin–tazobactam). Final models were chosen based on their discrimination, calibration, and number of predictors, and then tested on a held-out validation dataset. RESULTS: Included were 5,096 patients (80% training; 20% validation). Coverage ranged from 65% for cefazolin to 90% for cefepime. Positive blood cultures were present in 544 (11%) with 388 (71%), including a urinary pathogen. In the first 24 hours, 2329 (46%) were hypotensive, 2179 (43%) had a respiratory rate > 22, 2049 (40%) had a WBC > 12, 1079 (21%) were febrile, and 584 (11%) required ICU care. Final model covariates included demographics, antibiotic exposure, prior resistant pathogens, and antibiotic allergies. The five predictive models had a point-estimate for the area under the ROC on the validation set that ranged from 0.70 for ciprofloxacin to 0.73 for ceftriaxone. CONCLUSION: In this cohort of moderate to high acuity hospitalized patients with Gram-negative urinary pathogens, we used EHR data to develop 5 models that predict antibiotic coverage which could be used to support empiric prescribing. These models performed well in a held-out validation set. DISCLOSURES: All authors: No reported disclosures.
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spelling pubmed-68096922019-10-28 1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections Hebert, Courtney Gao, Yuan Rahman, Protiva Dewart, Courtney M Shah, Nirav Lustberg, Mark Stevenson, Kurt Pancholi, Preeti Hade, Erinn Open Forum Infect Dis Abstracts BACKGROUND: Providers use institutional recommendations, national guidelines, and antibiograms to decide on empiric antibiotics. As local antibiograms are most effective after organisms are known, we sought to use local microbiology and clinical data to develop predictive models for antibiotic coverage prior to identifying the organism. We focused on Gram-negative organisms as they are common urinary pathogens and are often the cause of sepsis originating in the urinary tract. As such, they are important to cover in hospitalized patients with urinary tract infections (UTI). METHODS: Hospitalized patients, with a diagnosis of UTI and a positive urine culture in the first 48 hours were included. Gram-positive organisms, yeast, and cultures without susceptibilities were excluded. Unknown susceptibilities were filled in using expert-derived rules. Clinical information from electronic health record (EHR) data were extracted on each patient. Penalized logistic regression with 10-fold cross validation was used to develop final models for coverage for five antibiotics (cefazolin, ceftriaxone, ciprofloxacin, cefepime, piperacillin–tazobactam). Final models were chosen based on their discrimination, calibration, and number of predictors, and then tested on a held-out validation dataset. RESULTS: Included were 5,096 patients (80% training; 20% validation). Coverage ranged from 65% for cefazolin to 90% for cefepime. Positive blood cultures were present in 544 (11%) with 388 (71%), including a urinary pathogen. In the first 24 hours, 2329 (46%) were hypotensive, 2179 (43%) had a respiratory rate > 22, 2049 (40%) had a WBC > 12, 1079 (21%) were febrile, and 584 (11%) required ICU care. Final model covariates included demographics, antibiotic exposure, prior resistant pathogens, and antibiotic allergies. The five predictive models had a point-estimate for the area under the ROC on the validation set that ranged from 0.70 for ciprofloxacin to 0.73 for ceftriaxone. CONCLUSION: In this cohort of moderate to high acuity hospitalized patients with Gram-negative urinary pathogens, we used EHR data to develop 5 models that predict antibiotic coverage which could be used to support empiric prescribing. These models performed well in a held-out validation set. DISCLOSURES: All authors: No reported disclosures. Oxford University Press 2019-10-23 /pmc/articles/PMC6809692/ http://dx.doi.org/10.1093/ofid/ofz360.1297 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of Infectious Diseases Society of America. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Abstracts
Hebert, Courtney
Gao, Yuan
Rahman, Protiva
Dewart, Courtney M
Shah, Nirav
Lustberg, Mark
Stevenson, Kurt
Pancholi, Preeti
Hade, Erinn
1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections
title 1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections
title_full 1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections
title_fullStr 1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections
title_full_unstemmed 1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections
title_short 1433. Predictive Models for Antibiotic Coverage of Gram-Negative Urinary Tract Infections
title_sort 1433. predictive models for antibiotic coverage of gram-negative urinary tract infections
topic Abstracts
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6809692/
http://dx.doi.org/10.1093/ofid/ofz360.1297
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