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Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics
Determining the structure of a network is of central importance to understanding its function in both neuroscience and applied mathematics. However, recovering the structural connectivity of neuronal networks remains a fundamental challenge both theoretically and experimentally. While neuronal netwo...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6811502/ https://www.ncbi.nlm.nih.gov/pubmed/31680835 http://dx.doi.org/10.3389/fnins.2019.01101 |
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author | Barranca, Victor J. Zhou, Douglas |
author_facet | Barranca, Victor J. Zhou, Douglas |
author_sort | Barranca, Victor J. |
collection | PubMed |
description | Determining the structure of a network is of central importance to understanding its function in both neuroscience and applied mathematics. However, recovering the structural connectivity of neuronal networks remains a fundamental challenge both theoretically and experimentally. While neuronal networks operate in certain dynamical regimes, which may influence their connectivity reconstruction, there is widespread experimental evidence of a balanced neuronal operating state in which strong excitatory and inhibitory inputs are dynamically adjusted such that neuronal voltages primarily remain near resting potential. Utilizing the dynamics of model neurons in such a balanced regime in conjunction with the ubiquitous sparse connectivity structure of neuronal networks, we develop a compressive sensing theoretical framework for efficiently reconstructing network connections by measuring individual neuronal activity in response to a relatively small ensemble of random stimuli injected over a short time scale. By tuning the network dynamical regime, we determine that the highest fidelity reconstructions are achievable in the balanced state. We hypothesize the balanced dynamics observed in vivo may therefore be a result of evolutionary selection for optimal information encoding and expect the methodology developed to be generalizable for alternative model networks as well as experimental paradigms. |
format | Online Article Text |
id | pubmed-6811502 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-68115022019-11-03 Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics Barranca, Victor J. Zhou, Douglas Front Neurosci Neuroscience Determining the structure of a network is of central importance to understanding its function in both neuroscience and applied mathematics. However, recovering the structural connectivity of neuronal networks remains a fundamental challenge both theoretically and experimentally. While neuronal networks operate in certain dynamical regimes, which may influence their connectivity reconstruction, there is widespread experimental evidence of a balanced neuronal operating state in which strong excitatory and inhibitory inputs are dynamically adjusted such that neuronal voltages primarily remain near resting potential. Utilizing the dynamics of model neurons in such a balanced regime in conjunction with the ubiquitous sparse connectivity structure of neuronal networks, we develop a compressive sensing theoretical framework for efficiently reconstructing network connections by measuring individual neuronal activity in response to a relatively small ensemble of random stimuli injected over a short time scale. By tuning the network dynamical regime, we determine that the highest fidelity reconstructions are achievable in the balanced state. We hypothesize the balanced dynamics observed in vivo may therefore be a result of evolutionary selection for optimal information encoding and expect the methodology developed to be generalizable for alternative model networks as well as experimental paradigms. Frontiers Media S.A. 2019-10-17 /pmc/articles/PMC6811502/ /pubmed/31680835 http://dx.doi.org/10.3389/fnins.2019.01101 Text en Copyright © 2019 Barranca and Zhou. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Barranca, Victor J. Zhou, Douglas Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics |
title | Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics |
title_full | Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics |
title_fullStr | Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics |
title_full_unstemmed | Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics |
title_short | Compressive Sensing Inference of Neuronal Network Connectivity in Balanced Neuronal Dynamics |
title_sort | compressive sensing inference of neuronal network connectivity in balanced neuronal dynamics |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6811502/ https://www.ncbi.nlm.nih.gov/pubmed/31680835 http://dx.doi.org/10.3389/fnins.2019.01101 |
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