The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree

Sengon (Falcataria moluccana), formerly known as Albizia falcataria or Paraserianthes falcataria, is an essential tree species for the development of community-based timber plantation, especially in Indonesia. The plantations nowadays are facing a significant disease threat, namely infection of gall...

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Autores principales: Shabrina, Hasyyati, Siregar, Ulfah J., Matra, Deden D., Siregar, Iskandar Z.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Agricultural and Biological Science
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6811874/
https://www.ncbi.nlm.nih.gov/pubmed/31667253
http://dx.doi.org/10.1016/j.dib.2019.104489
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author Shabrina, Hasyyati
Siregar, Ulfah J.
Matra, Deden D.
Siregar, Iskandar Z.
author_facet Shabrina, Hasyyati
Siregar, Ulfah J.
Matra, Deden D.
Siregar, Iskandar Z.
author_sort Shabrina, Hasyyati
collection PubMed
description Sengon (Falcataria moluccana), formerly known as Albizia falcataria or Paraserianthes falcataria, is an essential tree species for the development of community-based timber plantation, especially in Indonesia. The plantations nowadays are facing a significant disease threat, namely infection of gall-rust fungi (Uromycladium falcatarium). However, a clear understanding of the molecular mechanisms of the tree response against the disease is still unknown. We carried out transcriptome assembly using BGISEQ-500 technology to provide assembled de novo transcriptome dataset generated from gall-rust infected and non-infected trees. The construction of assembled transcriptome was conducted using Trinity v.2.3.2 The raw reads are available in the DDBJ platform with accession number, DRA007983.
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spelling pubmed-68118742019-10-30 The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree Shabrina, Hasyyati Siregar, Ulfah J. Matra, Deden D. Siregar, Iskandar Z. Data Brief Agricultural and Biological Science Sengon (Falcataria moluccana), formerly known as Albizia falcataria or Paraserianthes falcataria, is an essential tree species for the development of community-based timber plantation, especially in Indonesia. The plantations nowadays are facing a significant disease threat, namely infection of gall-rust fungi (Uromycladium falcatarium). However, a clear understanding of the molecular mechanisms of the tree response against the disease is still unknown. We carried out transcriptome assembly using BGISEQ-500 technology to provide assembled de novo transcriptome dataset generated from gall-rust infected and non-infected trees. The construction of assembled transcriptome was conducted using Trinity v.2.3.2 The raw reads are available in the DDBJ platform with accession number, DRA007983. Elsevier 2019-09-07 /pmc/articles/PMC6811874/ /pubmed/31667253 http://dx.doi.org/10.1016/j.dib.2019.104489 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Shabrina, Hasyyati
Siregar, Ulfah J.
Matra, Deden D.
Siregar, Iskandar Z.
The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree
title The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree
title_full The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree
title_fullStr The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree
title_full_unstemmed The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree
title_short The dataset of de novo transcriptome assembly of Falcataria moluccana cambium from gall-rust (Uromycladium falcatarium) infected and non-infected tree
title_sort dataset of de novo transcriptome assembly of falcataria moluccana cambium from gall-rust (uromycladium falcatarium) infected and non-infected tree
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6811874/
https://www.ncbi.nlm.nih.gov/pubmed/31667253
http://dx.doi.org/10.1016/j.dib.2019.104489
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