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Key challenges facing data-driven multicellular systems biology

Increasingly sophisticated experiments, coupled with large-scale computational models, have the potential to systematically test biological hypotheses to drive our understanding of multicellular systems. In this short review, we explore key challenges that must be overcome to achieve robust, repeata...

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Detalles Bibliográficos
Autor principal: Macklin, Paul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6812467/
https://www.ncbi.nlm.nih.gov/pubmed/31648301
http://dx.doi.org/10.1093/gigascience/giz127
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author Macklin, Paul
author_facet Macklin, Paul
author_sort Macklin, Paul
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description Increasingly sophisticated experiments, coupled with large-scale computational models, have the potential to systematically test biological hypotheses to drive our understanding of multicellular systems. In this short review, we explore key challenges that must be overcome to achieve robust, repeatable data-driven multicellular systems biology. If these challenges can be solved, we can grow beyond the current state of isolated tools and datasets to a community-driven ecosystem of interoperable data, software utilities, and computational modeling platforms. Progress is within our grasp, but it will take community (and financial) commitment.
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spelling pubmed-68124672019-10-28 Key challenges facing data-driven multicellular systems biology Macklin, Paul Gigascience Review Increasingly sophisticated experiments, coupled with large-scale computational models, have the potential to systematically test biological hypotheses to drive our understanding of multicellular systems. In this short review, we explore key challenges that must be overcome to achieve robust, repeatable data-driven multicellular systems biology. If these challenges can be solved, we can grow beyond the current state of isolated tools and datasets to a community-driven ecosystem of interoperable data, software utilities, and computational modeling platforms. Progress is within our grasp, but it will take community (and financial) commitment. Oxford University Press 2019-10-24 /pmc/articles/PMC6812467/ /pubmed/31648301 http://dx.doi.org/10.1093/gigascience/giz127 Text en © The Author(s) 2019. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Review
Macklin, Paul
Key challenges facing data-driven multicellular systems biology
title Key challenges facing data-driven multicellular systems biology
title_full Key challenges facing data-driven multicellular systems biology
title_fullStr Key challenges facing data-driven multicellular systems biology
title_full_unstemmed Key challenges facing data-driven multicellular systems biology
title_short Key challenges facing data-driven multicellular systems biology
title_sort key challenges facing data-driven multicellular systems biology
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6812467/
https://www.ncbi.nlm.nih.gov/pubmed/31648301
http://dx.doi.org/10.1093/gigascience/giz127
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