Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing

Hybrid de novo assembly of Illumina/Nanopore sequence data produced complete circular sequences of the chromosome and a plasmid for the multidrug-resistant Pseudomonas aeruginosa Houston-1 strain. This provides a high-quality representative sequence for a lineage endemic to a pediatric cystic fibros...

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Detalles Bibliográficos
Autores principales: Spinler, Jennifer K., Raza, Sabeen, Runge, Jessica K., Luna, Ruth Ann
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6813388/
https://www.ncbi.nlm.nih.gov/pubmed/31649076
http://dx.doi.org/10.1128/MRA.00903-19
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author Spinler, Jennifer K.
Raza, Sabeen
Runge, Jessica K.
Luna, Ruth Ann
author_facet Spinler, Jennifer K.
Raza, Sabeen
Runge, Jessica K.
Luna, Ruth Ann
author_sort Spinler, Jennifer K.
collection PubMed
description Hybrid de novo assembly of Illumina/Nanopore sequence data produced complete circular sequences of the chromosome and a plasmid for the multidrug-resistant Pseudomonas aeruginosa Houston-1 strain. This provides a high-quality representative sequence for a lineage endemic to a pediatric cystic fibrosis care center at Texas Children’s Hospital.
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spelling pubmed-68133882019-10-30 Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing Spinler, Jennifer K. Raza, Sabeen Runge, Jessica K. Luna, Ruth Ann Microbiol Resour Announc Genome Sequences Hybrid de novo assembly of Illumina/Nanopore sequence data produced complete circular sequences of the chromosome and a plasmid for the multidrug-resistant Pseudomonas aeruginosa Houston-1 strain. This provides a high-quality representative sequence for a lineage endemic to a pediatric cystic fibrosis care center at Texas Children’s Hospital. American Society for Microbiology 2019-10-24 /pmc/articles/PMC6813388/ /pubmed/31649076 http://dx.doi.org/10.1128/MRA.00903-19 Text en Copyright © 2019 Spinler et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Spinler, Jennifer K.
Raza, Sabeen
Runge, Jessica K.
Luna, Ruth Ann
Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing
title Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing
title_full Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing
title_fullStr Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing
title_full_unstemmed Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing
title_short Complete Genome Sequence of the Multidrug-Resistant Pseudomonas aeruginosa Endemic Houston-1 Strain, Isolated from a Pediatric Patient with Cystic Fibrosis and Assembled Using Oxford Nanopore and Illumina Sequencing
title_sort complete genome sequence of the multidrug-resistant pseudomonas aeruginosa endemic houston-1 strain, isolated from a pediatric patient with cystic fibrosis and assembled using oxford nanopore and illumina sequencing
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6813388/
https://www.ncbi.nlm.nih.gov/pubmed/31649076
http://dx.doi.org/10.1128/MRA.00903-19
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