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m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer

N6-methyladenosine (m(6)A) is the most common form of mRNA modification, and is dynamically regulated by the m(6)A RNA methylation regulators. However, little is known about m(6)A in gastric cancer. The aim of this work is to investigate the effects of m(6)A RNA methylation regulators in gastric can...

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Autores principales: Su, Yunshu, Huang, Jinqi, Hu, Jichang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6813557/
https://www.ncbi.nlm.nih.gov/pubmed/31681576
http://dx.doi.org/10.3389/fonc.2019.01038
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author Su, Yunshu
Huang, Jinqi
Hu, Jichang
author_facet Su, Yunshu
Huang, Jinqi
Hu, Jichang
author_sort Su, Yunshu
collection PubMed
description N6-methyladenosine (m(6)A) is the most common form of mRNA modification, and is dynamically regulated by the m(6)A RNA methylation regulators. However, little is known about m(6)A in gastric cancer. The aim of this work is to investigate the effects of m(6)A RNA methylation regulators in gastric cancer. Here, we found that most of the 13 main m(6)A RNA methylation regulators are higher expressed in 375 patients with gastric cancer. We identified two subgroups of gastric cancer (cluster1 and 2) by applying consensus clustering to m(6)A RNA methylation regulators. Compared with the cluster1 subgroup, the cluster2 subgroup correlates with a poorer prognosis, and most of the 13 main m(6)A RNA methylation regulators are higher expressed in cluster2. Moreover, the cancer-specific pathways are also significantly enriched in the cluster2 subgroup. This finding indicates that m(6)A RNA methylation regulators are closely associated with gastric cancer. Based on this finding, we derived a risk signature, using 3 m(6)A RNA methylation regulators (FTO, RBM15, ALKBH5), that is not only an independent prognostic marker but can also predict the clinicopathological features of gastric cancer. Moreover, FTO is higher expressed in high risk scores subtype in gastric cancer. Thus, this first finding provide us clues to understand epigenetic modification of RNA in gastric cancer.
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spelling pubmed-68135572019-11-01 m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer Su, Yunshu Huang, Jinqi Hu, Jichang Front Oncol Oncology N6-methyladenosine (m(6)A) is the most common form of mRNA modification, and is dynamically regulated by the m(6)A RNA methylation regulators. However, little is known about m(6)A in gastric cancer. The aim of this work is to investigate the effects of m(6)A RNA methylation regulators in gastric cancer. Here, we found that most of the 13 main m(6)A RNA methylation regulators are higher expressed in 375 patients with gastric cancer. We identified two subgroups of gastric cancer (cluster1 and 2) by applying consensus clustering to m(6)A RNA methylation regulators. Compared with the cluster1 subgroup, the cluster2 subgroup correlates with a poorer prognosis, and most of the 13 main m(6)A RNA methylation regulators are higher expressed in cluster2. Moreover, the cancer-specific pathways are also significantly enriched in the cluster2 subgroup. This finding indicates that m(6)A RNA methylation regulators are closely associated with gastric cancer. Based on this finding, we derived a risk signature, using 3 m(6)A RNA methylation regulators (FTO, RBM15, ALKBH5), that is not only an independent prognostic marker but can also predict the clinicopathological features of gastric cancer. Moreover, FTO is higher expressed in high risk scores subtype in gastric cancer. Thus, this first finding provide us clues to understand epigenetic modification of RNA in gastric cancer. Frontiers Media S.A. 2019-10-18 /pmc/articles/PMC6813557/ /pubmed/31681576 http://dx.doi.org/10.3389/fonc.2019.01038 Text en Copyright © 2019 Su, Huang and Hu. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Su, Yunshu
Huang, Jinqi
Hu, Jichang
m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer
title m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer
title_full m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer
title_fullStr m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer
title_full_unstemmed m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer
title_short m(6)A RNA Methylation Regulators Contribute to Malignant Progression and Have Clinical Prognostic Impact in Gastric Cancer
title_sort m(6)a rna methylation regulators contribute to malignant progression and have clinical prognostic impact in gastric cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6813557/
https://www.ncbi.nlm.nih.gov/pubmed/31681576
http://dx.doi.org/10.3389/fonc.2019.01038
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