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Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica
Antarctica is covered by multiple larger glaciers with diverse extreme conditions. Microorganisms in Antarctic regions are primarily responsible for diverse biogeochemical processes. The identity and functionality of microorganisms from polar glaciers are defined. However, little is known about micr...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6813960/ https://www.ncbi.nlm.nih.gov/pubmed/31681251 http://dx.doi.org/10.3389/fmicb.2019.02408 |
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author | Li, Yi Cha, Qian-Qian Dang, Yan-Ru Chen, Xiu-Lan Wang, Min McMinn, Andrew Espina, Giannina Zhang, Yu-Zhong Blamey, Jenny M. Qin, Qi-Long |
author_facet | Li, Yi Cha, Qian-Qian Dang, Yan-Ru Chen, Xiu-Lan Wang, Min McMinn, Andrew Espina, Giannina Zhang, Yu-Zhong Blamey, Jenny M. Qin, Qi-Long |
author_sort | Li, Yi |
collection | PubMed |
description | Antarctica is covered by multiple larger glaciers with diverse extreme conditions. Microorganisms in Antarctic regions are primarily responsible for diverse biogeochemical processes. The identity and functionality of microorganisms from polar glaciers are defined. However, little is known about microbial communities from the high elevation glaciers. The Union Glacier, located in the inland of West Antarctica at 79°S, is a challenging environment for life to survive due to the high irradiance and low temperatures. Here, soil and rock samples were obtained from three high mountains (Rossman Cove, Charles Peak, and Elephant Head) adjacent to the Union Glacier. Using metagenomic analyses, the functional microbial ecosystem was analyzed through the reconstruction of carbon, nitrogen and sulfur metabolic pathways. A low biomass but diverse microbial community was found. Although archaea were detected, bacteria were dominant. Taxa responsible for carbon fixation were comprised of photoautotrophs (Cyanobacteria) and chemoautotrophs (mainly Alphaproteobacterial clades: Bradyrhizobium, Sphingopyxis, and Nitrobacter). The main nitrogen fixation taxa were Halothece (Cyanobacteria), Methyloversatilis, and Leptothrix (Betaproteobacteria). Diverse sulfide-oxidizing and sulfate-reducing bacteria, fermenters, denitrifying microbes, methanogens, and methane oxidizers were also found. Putative producers provide organic carbon and nitrogen for the growth of other heterotrophic microbes. In the biogeochemical pathways, assimilation and mineralization of organic compounds were the dominant processes. Besides, a range of metabolic pathways and genes related to high irradiance, low temperature and other stress adaptations were detected, which indicate that the microbial communities had adapted to and could survive in this harsh environment. These results provide a detailed perspective of the microbial functional ecology of the Union Glacier area and improve our understanding of linkages between microbial communities and biogeochemical cycling in high Antarctic ecosystems. |
format | Online Article Text |
id | pubmed-6813960 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-68139602019-11-01 Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica Li, Yi Cha, Qian-Qian Dang, Yan-Ru Chen, Xiu-Lan Wang, Min McMinn, Andrew Espina, Giannina Zhang, Yu-Zhong Blamey, Jenny M. Qin, Qi-Long Front Microbiol Microbiology Antarctica is covered by multiple larger glaciers with diverse extreme conditions. Microorganisms in Antarctic regions are primarily responsible for diverse biogeochemical processes. The identity and functionality of microorganisms from polar glaciers are defined. However, little is known about microbial communities from the high elevation glaciers. The Union Glacier, located in the inland of West Antarctica at 79°S, is a challenging environment for life to survive due to the high irradiance and low temperatures. Here, soil and rock samples were obtained from three high mountains (Rossman Cove, Charles Peak, and Elephant Head) adjacent to the Union Glacier. Using metagenomic analyses, the functional microbial ecosystem was analyzed through the reconstruction of carbon, nitrogen and sulfur metabolic pathways. A low biomass but diverse microbial community was found. Although archaea were detected, bacteria were dominant. Taxa responsible for carbon fixation were comprised of photoautotrophs (Cyanobacteria) and chemoautotrophs (mainly Alphaproteobacterial clades: Bradyrhizobium, Sphingopyxis, and Nitrobacter). The main nitrogen fixation taxa were Halothece (Cyanobacteria), Methyloversatilis, and Leptothrix (Betaproteobacteria). Diverse sulfide-oxidizing and sulfate-reducing bacteria, fermenters, denitrifying microbes, methanogens, and methane oxidizers were also found. Putative producers provide organic carbon and nitrogen for the growth of other heterotrophic microbes. In the biogeochemical pathways, assimilation and mineralization of organic compounds were the dominant processes. Besides, a range of metabolic pathways and genes related to high irradiance, low temperature and other stress adaptations were detected, which indicate that the microbial communities had adapted to and could survive in this harsh environment. These results provide a detailed perspective of the microbial functional ecology of the Union Glacier area and improve our understanding of linkages between microbial communities and biogeochemical cycling in high Antarctic ecosystems. Frontiers Media S.A. 2019-10-18 /pmc/articles/PMC6813960/ /pubmed/31681251 http://dx.doi.org/10.3389/fmicb.2019.02408 Text en Copyright © 2019 Li, Cha, Dang, Chen, Wang, McMinn, Espina, Zhang, Blamey and Qin. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Li, Yi Cha, Qian-Qian Dang, Yan-Ru Chen, Xiu-Lan Wang, Min McMinn, Andrew Espina, Giannina Zhang, Yu-Zhong Blamey, Jenny M. Qin, Qi-Long Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica |
title | Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica |
title_full | Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica |
title_fullStr | Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica |
title_full_unstemmed | Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica |
title_short | Reconstruction of the Functional Ecosystem in the High Light, Low Temperature Union Glacier Region, Antarctica |
title_sort | reconstruction of the functional ecosystem in the high light, low temperature union glacier region, antarctica |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6813960/ https://www.ncbi.nlm.nih.gov/pubmed/31681251 http://dx.doi.org/10.3389/fmicb.2019.02408 |
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