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Three myths about risk thresholds for prediction models

BACKGROUND: Clinical prediction models are useful in estimating a patient’s risk of having a certain disease or experiencing an event in the future based on their current characteristics. Defining an appropriate risk threshold to recommend intervention is a key challenge in bringing a risk predictio...

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Autores principales: Wynants, Laure, van Smeden, Maarten, McLernon, David J., Timmerman, Dirk, Steyerberg, Ewout W., Van Calster, Ben
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814132/
https://www.ncbi.nlm.nih.gov/pubmed/31651317
http://dx.doi.org/10.1186/s12916-019-1425-3
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author Wynants, Laure
van Smeden, Maarten
McLernon, David J.
Timmerman, Dirk
Steyerberg, Ewout W.
Van Calster, Ben
author_facet Wynants, Laure
van Smeden, Maarten
McLernon, David J.
Timmerman, Dirk
Steyerberg, Ewout W.
Van Calster, Ben
author_sort Wynants, Laure
collection PubMed
description BACKGROUND: Clinical prediction models are useful in estimating a patient’s risk of having a certain disease or experiencing an event in the future based on their current characteristics. Defining an appropriate risk threshold to recommend intervention is a key challenge in bringing a risk prediction model to clinical application; such risk thresholds are often defined in an ad hoc way. This is problematic because tacitly assumed costs of false positive and false negative classifications may not be clinically sensible. For example, when choosing the risk threshold that maximizes the proportion of patients correctly classified, false positives and false negatives are assumed equally costly. Furthermore, small to moderate sample sizes may lead to unstable optimal thresholds, which requires a particularly cautious interpretation of results. MAIN TEXT: We discuss how three common myths about risk thresholds often lead to inappropriate risk stratification of patients. First, we point out the contexts of counseling and shared decision-making in which a continuous risk estimate is more useful than risk stratification. Second, we argue that threshold selection should reflect the consequences of the decisions made following risk stratification. Third, we emphasize that there is usually no universally optimal threshold but rather that a plausible risk threshold depends on the clinical context. Consequently, we recommend to present results for multiple risk thresholds when developing or validating a prediction model. CONCLUSION: Bearing in mind these three considerations can avoid inappropriate allocation (and non-allocation) of interventions. Using discriminating and well-calibrated models will generate better clinical outcomes if context-dependent thresholds are used.
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spelling pubmed-68141322019-10-31 Three myths about risk thresholds for prediction models Wynants, Laure van Smeden, Maarten McLernon, David J. Timmerman, Dirk Steyerberg, Ewout W. Van Calster, Ben BMC Med Opinion BACKGROUND: Clinical prediction models are useful in estimating a patient’s risk of having a certain disease or experiencing an event in the future based on their current characteristics. Defining an appropriate risk threshold to recommend intervention is a key challenge in bringing a risk prediction model to clinical application; such risk thresholds are often defined in an ad hoc way. This is problematic because tacitly assumed costs of false positive and false negative classifications may not be clinically sensible. For example, when choosing the risk threshold that maximizes the proportion of patients correctly classified, false positives and false negatives are assumed equally costly. Furthermore, small to moderate sample sizes may lead to unstable optimal thresholds, which requires a particularly cautious interpretation of results. MAIN TEXT: We discuss how three common myths about risk thresholds often lead to inappropriate risk stratification of patients. First, we point out the contexts of counseling and shared decision-making in which a continuous risk estimate is more useful than risk stratification. Second, we argue that threshold selection should reflect the consequences of the decisions made following risk stratification. Third, we emphasize that there is usually no universally optimal threshold but rather that a plausible risk threshold depends on the clinical context. Consequently, we recommend to present results for multiple risk thresholds when developing or validating a prediction model. CONCLUSION: Bearing in mind these three considerations can avoid inappropriate allocation (and non-allocation) of interventions. Using discriminating and well-calibrated models will generate better clinical outcomes if context-dependent thresholds are used. BioMed Central 2019-10-25 /pmc/articles/PMC6814132/ /pubmed/31651317 http://dx.doi.org/10.1186/s12916-019-1425-3 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Opinion
Wynants, Laure
van Smeden, Maarten
McLernon, David J.
Timmerman, Dirk
Steyerberg, Ewout W.
Van Calster, Ben
Three myths about risk thresholds for prediction models
title Three myths about risk thresholds for prediction models
title_full Three myths about risk thresholds for prediction models
title_fullStr Three myths about risk thresholds for prediction models
title_full_unstemmed Three myths about risk thresholds for prediction models
title_short Three myths about risk thresholds for prediction models
title_sort three myths about risk thresholds for prediction models
topic Opinion
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814132/
https://www.ncbi.nlm.nih.gov/pubmed/31651317
http://dx.doi.org/10.1186/s12916-019-1425-3
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