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A machine learning approach for the prediction of pulmonary hypertension
BACKGROUND: Machine learning (ML) is a powerful tool for identifying and structuring several informative variables for predictive tasks. Here, we investigated how ML algorithms may assist in echocardiographic pulmonary hypertension (PH) prediction, where current guidelines recommend integrating seve...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814224/ https://www.ncbi.nlm.nih.gov/pubmed/31652290 http://dx.doi.org/10.1371/journal.pone.0224453 |
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author | Leha, Andreas Hellenkamp, Kristian Unsöld, Bernhard Mushemi-Blake, Sitali Shah, Ajay M. Hasenfuß, Gerd Seidler, Tim |
author_facet | Leha, Andreas Hellenkamp, Kristian Unsöld, Bernhard Mushemi-Blake, Sitali Shah, Ajay M. Hasenfuß, Gerd Seidler, Tim |
author_sort | Leha, Andreas |
collection | PubMed |
description | BACKGROUND: Machine learning (ML) is a powerful tool for identifying and structuring several informative variables for predictive tasks. Here, we investigated how ML algorithms may assist in echocardiographic pulmonary hypertension (PH) prediction, where current guidelines recommend integrating several echocardiographic parameters. METHODS: In our database of 90 patients with invasively determined pulmonary artery pressure (PAP) with corresponding echocardiographic estimations of PAP obtained within 24 hours, we trained and applied five ML algorithms (random forest of classification trees, random forest of regression trees, lasso penalized logistic regression, boosted classification trees, support vector machines) using a 10 times 3-fold cross-validation (CV) scheme. RESULTS: ML algorithms achieved high prediction accuracies: support vector machines (AUC 0.83; 95% CI 0.73–0.93), boosted classification trees (AUC 0.80; 95% CI 0.68–0.92), lasso penalized logistic regression (AUC 0.78; 95% CI 0.67–0.89), random forest of classification trees (AUC 0.85; 95% CI 0.75–0.95), random forest of regression trees (AUC 0.87; 95% CI 0.78–0.96). In contrast to the best of several conventional formulae (by Aduen et al.), this ML algorithm is based on several echocardiographic signs and feature selection, with estimated right atrial pressure (RAP) being of minor importance. CONCLUSIONS: Using ML, we were able to predict pulmonary hypertension based on a broader set of echocardiographic data with little reliance on estimated RAP compared to an existing formula with non-inferior performance. With the conceptual advantages of a broader and unbiased selection and weighting of data our ML approach is suited for high level assistance in PH prediction. |
format | Online Article Text |
id | pubmed-6814224 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-68142242019-11-03 A machine learning approach for the prediction of pulmonary hypertension Leha, Andreas Hellenkamp, Kristian Unsöld, Bernhard Mushemi-Blake, Sitali Shah, Ajay M. Hasenfuß, Gerd Seidler, Tim PLoS One Research Article BACKGROUND: Machine learning (ML) is a powerful tool for identifying and structuring several informative variables for predictive tasks. Here, we investigated how ML algorithms may assist in echocardiographic pulmonary hypertension (PH) prediction, where current guidelines recommend integrating several echocardiographic parameters. METHODS: In our database of 90 patients with invasively determined pulmonary artery pressure (PAP) with corresponding echocardiographic estimations of PAP obtained within 24 hours, we trained and applied five ML algorithms (random forest of classification trees, random forest of regression trees, lasso penalized logistic regression, boosted classification trees, support vector machines) using a 10 times 3-fold cross-validation (CV) scheme. RESULTS: ML algorithms achieved high prediction accuracies: support vector machines (AUC 0.83; 95% CI 0.73–0.93), boosted classification trees (AUC 0.80; 95% CI 0.68–0.92), lasso penalized logistic regression (AUC 0.78; 95% CI 0.67–0.89), random forest of classification trees (AUC 0.85; 95% CI 0.75–0.95), random forest of regression trees (AUC 0.87; 95% CI 0.78–0.96). In contrast to the best of several conventional formulae (by Aduen et al.), this ML algorithm is based on several echocardiographic signs and feature selection, with estimated right atrial pressure (RAP) being of minor importance. CONCLUSIONS: Using ML, we were able to predict pulmonary hypertension based on a broader set of echocardiographic data with little reliance on estimated RAP compared to an existing formula with non-inferior performance. With the conceptual advantages of a broader and unbiased selection and weighting of data our ML approach is suited for high level assistance in PH prediction. Public Library of Science 2019-10-25 /pmc/articles/PMC6814224/ /pubmed/31652290 http://dx.doi.org/10.1371/journal.pone.0224453 Text en © 2019 Leha et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Leha, Andreas Hellenkamp, Kristian Unsöld, Bernhard Mushemi-Blake, Sitali Shah, Ajay M. Hasenfuß, Gerd Seidler, Tim A machine learning approach for the prediction of pulmonary hypertension |
title | A machine learning approach for the prediction of pulmonary hypertension |
title_full | A machine learning approach for the prediction of pulmonary hypertension |
title_fullStr | A machine learning approach for the prediction of pulmonary hypertension |
title_full_unstemmed | A machine learning approach for the prediction of pulmonary hypertension |
title_short | A machine learning approach for the prediction of pulmonary hypertension |
title_sort | machine learning approach for the prediction of pulmonary hypertension |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814224/ https://www.ncbi.nlm.nih.gov/pubmed/31652290 http://dx.doi.org/10.1371/journal.pone.0224453 |
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