Cargando…

A machine learning approach for the prediction of pulmonary hypertension

BACKGROUND: Machine learning (ML) is a powerful tool for identifying and structuring several informative variables for predictive tasks. Here, we investigated how ML algorithms may assist in echocardiographic pulmonary hypertension (PH) prediction, where current guidelines recommend integrating seve...

Descripción completa

Detalles Bibliográficos
Autores principales: Leha, Andreas, Hellenkamp, Kristian, Unsöld, Bernhard, Mushemi-Blake, Sitali, Shah, Ajay M., Hasenfuß, Gerd, Seidler, Tim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814224/
https://www.ncbi.nlm.nih.gov/pubmed/31652290
http://dx.doi.org/10.1371/journal.pone.0224453
_version_ 1783462974982193152
author Leha, Andreas
Hellenkamp, Kristian
Unsöld, Bernhard
Mushemi-Blake, Sitali
Shah, Ajay M.
Hasenfuß, Gerd
Seidler, Tim
author_facet Leha, Andreas
Hellenkamp, Kristian
Unsöld, Bernhard
Mushemi-Blake, Sitali
Shah, Ajay M.
Hasenfuß, Gerd
Seidler, Tim
author_sort Leha, Andreas
collection PubMed
description BACKGROUND: Machine learning (ML) is a powerful tool for identifying and structuring several informative variables for predictive tasks. Here, we investigated how ML algorithms may assist in echocardiographic pulmonary hypertension (PH) prediction, where current guidelines recommend integrating several echocardiographic parameters. METHODS: In our database of 90 patients with invasively determined pulmonary artery pressure (PAP) with corresponding echocardiographic estimations of PAP obtained within 24 hours, we trained and applied five ML algorithms (random forest of classification trees, random forest of regression trees, lasso penalized logistic regression, boosted classification trees, support vector machines) using a 10 times 3-fold cross-validation (CV) scheme. RESULTS: ML algorithms achieved high prediction accuracies: support vector machines (AUC 0.83; 95% CI 0.73–0.93), boosted classification trees (AUC 0.80; 95% CI 0.68–0.92), lasso penalized logistic regression (AUC 0.78; 95% CI 0.67–0.89), random forest of classification trees (AUC 0.85; 95% CI 0.75–0.95), random forest of regression trees (AUC 0.87; 95% CI 0.78–0.96). In contrast to the best of several conventional formulae (by Aduen et al.), this ML algorithm is based on several echocardiographic signs and feature selection, with estimated right atrial pressure (RAP) being of minor importance. CONCLUSIONS: Using ML, we were able to predict pulmonary hypertension based on a broader set of echocardiographic data with little reliance on estimated RAP compared to an existing formula with non-inferior performance. With the conceptual advantages of a broader and unbiased selection and weighting of data our ML approach is suited for high level assistance in PH prediction.
format Online
Article
Text
id pubmed-6814224
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-68142242019-11-03 A machine learning approach for the prediction of pulmonary hypertension Leha, Andreas Hellenkamp, Kristian Unsöld, Bernhard Mushemi-Blake, Sitali Shah, Ajay M. Hasenfuß, Gerd Seidler, Tim PLoS One Research Article BACKGROUND: Machine learning (ML) is a powerful tool for identifying and structuring several informative variables for predictive tasks. Here, we investigated how ML algorithms may assist in echocardiographic pulmonary hypertension (PH) prediction, where current guidelines recommend integrating several echocardiographic parameters. METHODS: In our database of 90 patients with invasively determined pulmonary artery pressure (PAP) with corresponding echocardiographic estimations of PAP obtained within 24 hours, we trained and applied five ML algorithms (random forest of classification trees, random forest of regression trees, lasso penalized logistic regression, boosted classification trees, support vector machines) using a 10 times 3-fold cross-validation (CV) scheme. RESULTS: ML algorithms achieved high prediction accuracies: support vector machines (AUC 0.83; 95% CI 0.73–0.93), boosted classification trees (AUC 0.80; 95% CI 0.68–0.92), lasso penalized logistic regression (AUC 0.78; 95% CI 0.67–0.89), random forest of classification trees (AUC 0.85; 95% CI 0.75–0.95), random forest of regression trees (AUC 0.87; 95% CI 0.78–0.96). In contrast to the best of several conventional formulae (by Aduen et al.), this ML algorithm is based on several echocardiographic signs and feature selection, with estimated right atrial pressure (RAP) being of minor importance. CONCLUSIONS: Using ML, we were able to predict pulmonary hypertension based on a broader set of echocardiographic data with little reliance on estimated RAP compared to an existing formula with non-inferior performance. With the conceptual advantages of a broader and unbiased selection and weighting of data our ML approach is suited for high level assistance in PH prediction. Public Library of Science 2019-10-25 /pmc/articles/PMC6814224/ /pubmed/31652290 http://dx.doi.org/10.1371/journal.pone.0224453 Text en © 2019 Leha et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Leha, Andreas
Hellenkamp, Kristian
Unsöld, Bernhard
Mushemi-Blake, Sitali
Shah, Ajay M.
Hasenfuß, Gerd
Seidler, Tim
A machine learning approach for the prediction of pulmonary hypertension
title A machine learning approach for the prediction of pulmonary hypertension
title_full A machine learning approach for the prediction of pulmonary hypertension
title_fullStr A machine learning approach for the prediction of pulmonary hypertension
title_full_unstemmed A machine learning approach for the prediction of pulmonary hypertension
title_short A machine learning approach for the prediction of pulmonary hypertension
title_sort machine learning approach for the prediction of pulmonary hypertension
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814224/
https://www.ncbi.nlm.nih.gov/pubmed/31652290
http://dx.doi.org/10.1371/journal.pone.0224453
work_keys_str_mv AT lehaandreas amachinelearningapproachforthepredictionofpulmonaryhypertension
AT hellenkampkristian amachinelearningapproachforthepredictionofpulmonaryhypertension
AT unsoldbernhard amachinelearningapproachforthepredictionofpulmonaryhypertension
AT mushemiblakesitali amachinelearningapproachforthepredictionofpulmonaryhypertension
AT shahajaym amachinelearningapproachforthepredictionofpulmonaryhypertension
AT hasenfußgerd amachinelearningapproachforthepredictionofpulmonaryhypertension
AT seidlertim amachinelearningapproachforthepredictionofpulmonaryhypertension
AT lehaandreas machinelearningapproachforthepredictionofpulmonaryhypertension
AT hellenkampkristian machinelearningapproachforthepredictionofpulmonaryhypertension
AT unsoldbernhard machinelearningapproachforthepredictionofpulmonaryhypertension
AT mushemiblakesitali machinelearningapproachforthepredictionofpulmonaryhypertension
AT shahajaym machinelearningapproachforthepredictionofpulmonaryhypertension
AT hasenfußgerd machinelearningapproachforthepredictionofpulmonaryhypertension
AT seidlertim machinelearningapproachforthepredictionofpulmonaryhypertension