Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'

Chen et al. recently reported evidence for inter-nucleus recombination in arbuscular mycorrhizal fungi (Chen et al., 2018a). Here, we report a reanalysis of their data. After filtering the data by excluding heterozygous sites in haploid nuclei, duplicated regions of the genome, and low-coverage dept...

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Detalles Bibliográficos
Autores principales: Auxier, Benjamin, Bazzicalupo, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2019
Materias:
Evolutionary Biology
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814362/
https://www.ncbi.nlm.nih.gov/pubmed/31650958
http://dx.doi.org/10.7554/eLife.47301
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author Auxier, Benjamin
Bazzicalupo, Anna
author_facet Auxier, Benjamin
Bazzicalupo, Anna
author_sort Auxier, Benjamin
collection PubMed
description Chen et al. recently reported evidence for inter-nucleus recombination in arbuscular mycorrhizal fungi (Chen et al., 2018a). Here, we report a reanalysis of their data. After filtering the data by excluding heterozygous sites in haploid nuclei, duplicated regions of the genome, and low-coverage depths base calls, we find the evidence for recombination to be very sparse.
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spelling pubmed-68143622019-10-28 Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi' Auxier, Benjamin Bazzicalupo, Anna eLife Evolutionary Biology Chen et al. recently reported evidence for inter-nucleus recombination in arbuscular mycorrhizal fungi (Chen et al., 2018a). Here, we report a reanalysis of their data. After filtering the data by excluding heterozygous sites in haploid nuclei, duplicated regions of the genome, and low-coverage depths base calls, we find the evidence for recombination to be very sparse. eLife Sciences Publications, Ltd 2019-10-25 /pmc/articles/PMC6814362/ /pubmed/31650958 http://dx.doi.org/10.7554/eLife.47301 Text en © 2019, Auxier and Bazzicalupo http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Evolutionary Biology
Auxier, Benjamin
Bazzicalupo, Anna
Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'
title Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'
title_full Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'
title_fullStr Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'
title_full_unstemmed Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'
title_short Comment on 'Single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'
title_sort comment on 'single nucleus sequencing reveals evidence of inter-nucleus recombination in arbuscular mycorrhizal fungi'
topic Evolutionary Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814362/
https://www.ncbi.nlm.nih.gov/pubmed/31650958
http://dx.doi.org/10.7554/eLife.47301
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AT bazzicalupoanna commentonsinglenucleussequencingrevealsevidenceofinternucleusrecombinationinarbuscularmycorrhizalfungi

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