Cargando…

Analysis of allele-specific expression using RNA-seq of the Korean native pig and Landrace reciprocal cross

OBJECTIVE: We tried to analyze allele-specific expression in the pig neocortex using bioinformatic analysis of high-throughput sequencing results from the parental genomes and offspring transcriptomes from reciprocal crosses between Korean Native and Landrace pigs. METHODS: We carried out sequencing...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ahn, Byeongyong, Choi, Min-Kyeung, Yum, Joori, Cho, In-Cheol, Kim, Jin-Hoi, Park, Chankyu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Asian-Australasian Association of Animal Production Societies (AAAP) and Korean Society of Animal Science and Technology (KSAST) 2019
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6819674/ https://www.ncbi.nlm.nih.gov/pubmed/31208168 http://dx.doi.org/10.5713/ajas.19.0097

Ejemplares similares

Origin and population structure of native dog breeds in the Korean peninsula and East Asia
por: Ahn, Byeongyong, et al.
Publicado: (2023)

Opossum Cathelicidins Exhibit Antimicrobial Activity Against a Broad Spectrum of Pathogens Including West Nile Virus
por: Cho, Hye-sun, et al.
Publicado: (2020)

Comparison of Live Performance and Meat Quality Parameter of Cross Bred (Korean Native Black Pig and Landrace) Pigs with Different Coat Colors
por: Hur, S. J., et al.
Publicado: (2013)

SLA-1 Genetic Diversity in Pigs: Extensive Analysis of Copy Number Variation, Heterozygosity, Expression, and Breed Specificity
por: Le, Minh Thong, et al.
Publicado: (2020)

Genome-wide QTL analysis of meat quality-related traits in a large F(2) intercross between Landrace and Korean native pigs
por: Cho, In-Cheol, et al.
Publicado: (2015)

Individual and population diversity of 20 representative olfactory receptor genes in pigs
por: Kang, Mingue, et al.
Publicado: (2023)

Tracing the Origin of the RSPO2 Long-Hair Allele and Epistatic Interaction between FGF5 and RSPO2 in Sapsaree Dog
por: Kang, Mingue, et al.
Publicado: (2022)

Genetic Analysis of Major Production and Reproduction Traits of Korean Duroc, Landrace and Yorkshire Pigs
por: Alam, Mahboob, et al.
Publicado: (2021)

Genomewide Analysis and Biological Characterization of Cathelicidins with Potent Antimicrobial Activity and Low Cytotoxicity from Three Bat Species
por: Choi, Munjeong, et al.
Publicado: (2022)

Demonstration of local adaptation in maize landraces by reciprocal transplantation
por: Janzen, Garrett M., et al.
Publicado: (2022)

High-Quality Nucleic Acid Isolation from Hard-to-Lyse Bacterial Strains Using PMAP-36, a Broad-Spectrum Antimicrobial Peptide
por: Cho, Hye-sun, et al.
Publicado: (2021)

Population differentiated copy number variation between Eurasian wild boar and domesticated pig populations
por: Jang, Jisung, et al.
Publicado: (2023)

A Whole Genome Association Study on Meat Quality Traits Using High Density SNP Chips in a Cross between Korean Native Pig and Landrace
por: Lee, K.-T, et al.
Publicado: (2012)

Genome scan linkage analysis identifies a major quantitative trait loci for fatty acid composition in longissimus dorsi muscle in an F(2) intercross between Landrace and Korean native pigs
por: Park, Hee-Bok, et al.
Publicado: (2017)

Production of Cloned Korean Native Pig by Somatic Cell Nuclear Transfer
por: Hwang, In-Sul, et al.
Publicado: (2015)

Protegrin-1 cytotoxicity towards mammalian cells positively correlates with the magnitude of conformational changes of the unfolded form upon cell interaction
por: Soundrarajan, Nagasundarapandian, et al.
Publicado: (2019)

Green fluorescent protein as a scaffold for high efficiency production of functional bacteriotoxic proteins in Escherichia coli
por: Soundrarajan, Nagasundarapandian, et al.
Publicado: (2016)

Length polymorphism in OGT between Korean native pig, Chinese Meishan, and the Western pig breeds
por: Nam, Yoon Seok, et al.
Publicado: (2015)

A genome-wide association study of social genetic effects in Landrace pigs
por: Hong, Joon Ki, et al.
Publicado: (2018)

The complete swine olfactory subgenome: expansion of the olfactory gene repertoire in the pig genome
por: Nguyen, Dinh Truong, et al.
Publicado: (2012)

β2-microglobulin gene duplication in cetartiodactyla remains intact only in pigs and possibly confers selective advantage to the species
por: Le, Thong Minh, et al.
Publicado: (2017)

Genomic structure of a crossbred Landrace pig population
por: Joaquim, Letícia Borges, et al.
Publicado: (2019)

Physicochemical properties of M. longissimus dorsi of Korean native pigs
por: Kim, Gye-Woong, et al.
Publicado: (2018)

Genetic Diversity and Ancestral Study for Korean Native Pigs Using 60K SNP Chip
por: Lee, Soo Hyun, et al.
Publicado: (2020)

Waxy allele diversification in foxtail millet (Setaria italica) landraces of Taiwan
por: Kuo, Shu-meng, et al.
Publicado: (2018)

Verification of Reproducibility of VCS2000 Equipment for Mechanical Measurement of Korean Landrace×Yorkshire (F1), F1×Duroc (LYD) Pig Carcasses
por: Park, Yunhwan, et al.
Publicado: (2023)

The Differential Proliferative Ability of Satellite Cells in Lantang and Landrace Pigs
por: Wang, Xiu-qi, et al.
Publicado: (2012)

Comparative biogeography of the gut microbiome between Jinhua and Landrace pigs
por: Xiao, Yingping, et al.
Publicado: (2018)

Feasibility and safety of “bridging” pancreaticogastrostomy for pancreatic trauma in Landrace pigs
por: Feng, Jian, et al.
Publicado: (2021)

Correction to: Physicochemical properties of M. longissimus dorsi of Korean native pigs
por: Kim, Gye-Woong, et al.
Publicado: (2018)

Association of MICA Alleles with Autoimmune Thyroid Disease in Korean Children
por: Cho, Won Kyoung, et al.
Publicado: (2012)

Swine Leukocyte Antigen Diversity in Canadian Specific Pathogen-Free Yorkshire and Landrace Pigs
por: Gao, Caixia, et al.
Publicado: (2017)

Phytochemicals and Antioxidant Activity of Korean Black Soybean (Glycine max L.) Landraces
por: Lee, Kyung Jun, et al.
Publicado: (2020)

Oropharyngeal, proximal colonic, and vaginal microbiomes of healthy Korean native black pig gilts
por: Bugenyi, Andrew Wange, et al.
Publicado: (2023)

Two cases of meningocele and meningoencephalocele in Jeju native pigs
por: Cho, In-Cheol, et al.
Publicado: (2015)

Efficiency of genomic prediction for boar taint reduction in Danish Landrace pigs
por: Lukić, B., et al.
Publicado: (2015)

The fecal microbiota composition of boar Duroc, Yorkshire, Landrace and Hampshire pigs
por: Xiao, Yingping, et al.
Publicado: (2017)

Transcriptome Analysis of Landrace Pig Subcutaneous Preadipocytes during Adipogenic Differentiation
por: Zhao, Xitong, et al.
Publicado: (2019)

Impact of merging commercial breeding lines on the genetic diversity of Landrace pigs
por: Hulsegge, Ina, et al.
Publicado: (2019)

AlleleSeq: analysis of allele-specific expression and binding in a network framework
por: Rozowsky, Joel, et al.
Publicado: (2011)

Cannot write session to /tmp/vufind_sessions/sess_862peuj0g8e6i3hbtt59321tu2