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Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction
Recent advancements in deep learning for automated image processing and classification have accelerated many new applications for medical image analysis. However, most deep learning algorithms have been developed using reconstructed, human-interpretable medical images. While image reconstruction fro...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820559/ https://www.ncbi.nlm.nih.gov/pubmed/31664075 http://dx.doi.org/10.1038/s41598-019-51779-5 |
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author | Lee, Hyunkwang Huang, Chao Yune, Sehyo Tajmir, Shahein H. Kim, Myeongchan Do, Synho |
author_facet | Lee, Hyunkwang Huang, Chao Yune, Sehyo Tajmir, Shahein H. Kim, Myeongchan Do, Synho |
author_sort | Lee, Hyunkwang |
collection | PubMed |
description | Recent advancements in deep learning for automated image processing and classification have accelerated many new applications for medical image analysis. However, most deep learning algorithms have been developed using reconstructed, human-interpretable medical images. While image reconstruction from raw sensor data is required for the creation of medical images, the reconstruction process only uses a partial representation of all the data acquired. Here, we report the development of a system to directly process raw computed tomography (CT) data in sinogram-space, bypassing the intermediary step of image reconstruction. Two classification tasks were evaluated for their feasibility of sinogram-space machine learning: body region identification and intracranial hemorrhage (ICH) detection. Our proposed SinoNet, a convolutional neural network optimized for interpreting sinograms, performed favorably compared to conventional reconstructed image-space-based systems for both tasks, regardless of scanning geometries in terms of projections or detectors. Further, SinoNet performed significantly better when using sparsely sampled sinograms than conventional networks operating in image-space. As a result, sinogram-space algorithms could be used in field settings for triage (presence of ICH), especially where low radiation dose is desired. These findings also demonstrate another strength of deep learning where it can analyze and interpret sinograms that are virtually impossible for human experts. |
format | Online Article Text |
id | pubmed-6820559 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68205592019-11-04 Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction Lee, Hyunkwang Huang, Chao Yune, Sehyo Tajmir, Shahein H. Kim, Myeongchan Do, Synho Sci Rep Article Recent advancements in deep learning for automated image processing and classification have accelerated many new applications for medical image analysis. However, most deep learning algorithms have been developed using reconstructed, human-interpretable medical images. While image reconstruction from raw sensor data is required for the creation of medical images, the reconstruction process only uses a partial representation of all the data acquired. Here, we report the development of a system to directly process raw computed tomography (CT) data in sinogram-space, bypassing the intermediary step of image reconstruction. Two classification tasks were evaluated for their feasibility of sinogram-space machine learning: body region identification and intracranial hemorrhage (ICH) detection. Our proposed SinoNet, a convolutional neural network optimized for interpreting sinograms, performed favorably compared to conventional reconstructed image-space-based systems for both tasks, regardless of scanning geometries in terms of projections or detectors. Further, SinoNet performed significantly better when using sparsely sampled sinograms than conventional networks operating in image-space. As a result, sinogram-space algorithms could be used in field settings for triage (presence of ICH), especially where low radiation dose is desired. These findings also demonstrate another strength of deep learning where it can analyze and interpret sinograms that are virtually impossible for human experts. Nature Publishing Group UK 2019-10-29 /pmc/articles/PMC6820559/ /pubmed/31664075 http://dx.doi.org/10.1038/s41598-019-51779-5 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Lee, Hyunkwang Huang, Chao Yune, Sehyo Tajmir, Shahein H. Kim, Myeongchan Do, Synho Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction |
title | Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction |
title_full | Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction |
title_fullStr | Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction |
title_full_unstemmed | Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction |
title_short | Machine Friendly Machine Learning: Interpretation of Computed Tomography Without Image Reconstruction |
title_sort | machine friendly machine learning: interpretation of computed tomography without image reconstruction |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820559/ https://www.ncbi.nlm.nih.gov/pubmed/31664075 http://dx.doi.org/10.1038/s41598-019-51779-5 |
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