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dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction

Nanomedicine development currently suffers from a lack of efficient tools to predict pharmacokinetic behavior without relying upon testing in large numbers of animals, impacting success rates and development costs. This work presents dendPoint, the first in silico model to predict the intravenous ph...

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Autores principales: Kaminskas, Lisa M., Pires, Douglas E. V., Ascher, David B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820739/
https://www.ncbi.nlm.nih.gov/pubmed/31664080
http://dx.doi.org/10.1038/s41598-019-51789-3
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author Kaminskas, Lisa M.
Pires, Douglas E. V.
Ascher, David B.
author_facet Kaminskas, Lisa M.
Pires, Douglas E. V.
Ascher, David B.
author_sort Kaminskas, Lisa M.
collection PubMed
description Nanomedicine development currently suffers from a lack of efficient tools to predict pharmacokinetic behavior without relying upon testing in large numbers of animals, impacting success rates and development costs. This work presents dendPoint, the first in silico model to predict the intravenous pharmacokinetics of dendrimers, a commonly explored drug vector, based on physicochemical properties. We have manually curated the largest relational database of dendrimer pharmacokinetic parameters and their structural/physicochemical properties. This was used to develop a machine learning-based model capable of accurately predicting pharmacokinetic parameters, including half-life, clearance, volume of distribution and dose recovered in the liver and urine. dendPoint successfully predicts dendrimer pharmacokinetic properties, achieving correlations of up to r = 0.83 and Q(2) up to 0.68. dendPoint is freely available as a user-friendly web-service and database at http://biosig.unimelb.edu.au/dendpoint. This platform is ultimately expected to be used to guide dendrimer construct design and refinement prior to embarking on more time consuming and expensive in vivo testing.
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spelling pubmed-68207392019-11-04 dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction Kaminskas, Lisa M. Pires, Douglas E. V. Ascher, David B. Sci Rep Article Nanomedicine development currently suffers from a lack of efficient tools to predict pharmacokinetic behavior without relying upon testing in large numbers of animals, impacting success rates and development costs. This work presents dendPoint, the first in silico model to predict the intravenous pharmacokinetics of dendrimers, a commonly explored drug vector, based on physicochemical properties. We have manually curated the largest relational database of dendrimer pharmacokinetic parameters and their structural/physicochemical properties. This was used to develop a machine learning-based model capable of accurately predicting pharmacokinetic parameters, including half-life, clearance, volume of distribution and dose recovered in the liver and urine. dendPoint successfully predicts dendrimer pharmacokinetic properties, achieving correlations of up to r = 0.83 and Q(2) up to 0.68. dendPoint is freely available as a user-friendly web-service and database at http://biosig.unimelb.edu.au/dendpoint. This platform is ultimately expected to be used to guide dendrimer construct design and refinement prior to embarking on more time consuming and expensive in vivo testing. Nature Publishing Group UK 2019-10-29 /pmc/articles/PMC6820739/ /pubmed/31664080 http://dx.doi.org/10.1038/s41598-019-51789-3 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kaminskas, Lisa M.
Pires, Douglas E. V.
Ascher, David B.
dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction
title dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction
title_full dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction
title_fullStr dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction
title_full_unstemmed dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction
title_short dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction
title_sort dendpoint: a web resource for dendrimer pharmacokinetics investigation and prediction
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820739/
https://www.ncbi.nlm.nih.gov/pubmed/31664080
http://dx.doi.org/10.1038/s41598-019-51789-3
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