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dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction
Nanomedicine development currently suffers from a lack of efficient tools to predict pharmacokinetic behavior without relying upon testing in large numbers of animals, impacting success rates and development costs. This work presents dendPoint, the first in silico model to predict the intravenous ph...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820739/ https://www.ncbi.nlm.nih.gov/pubmed/31664080 http://dx.doi.org/10.1038/s41598-019-51789-3 |
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author | Kaminskas, Lisa M. Pires, Douglas E. V. Ascher, David B. |
author_facet | Kaminskas, Lisa M. Pires, Douglas E. V. Ascher, David B. |
author_sort | Kaminskas, Lisa M. |
collection | PubMed |
description | Nanomedicine development currently suffers from a lack of efficient tools to predict pharmacokinetic behavior without relying upon testing in large numbers of animals, impacting success rates and development costs. This work presents dendPoint, the first in silico model to predict the intravenous pharmacokinetics of dendrimers, a commonly explored drug vector, based on physicochemical properties. We have manually curated the largest relational database of dendrimer pharmacokinetic parameters and their structural/physicochemical properties. This was used to develop a machine learning-based model capable of accurately predicting pharmacokinetic parameters, including half-life, clearance, volume of distribution and dose recovered in the liver and urine. dendPoint successfully predicts dendrimer pharmacokinetic properties, achieving correlations of up to r = 0.83 and Q(2) up to 0.68. dendPoint is freely available as a user-friendly web-service and database at http://biosig.unimelb.edu.au/dendpoint. This platform is ultimately expected to be used to guide dendrimer construct design and refinement prior to embarking on more time consuming and expensive in vivo testing. |
format | Online Article Text |
id | pubmed-6820739 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68207392019-11-04 dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction Kaminskas, Lisa M. Pires, Douglas E. V. Ascher, David B. Sci Rep Article Nanomedicine development currently suffers from a lack of efficient tools to predict pharmacokinetic behavior without relying upon testing in large numbers of animals, impacting success rates and development costs. This work presents dendPoint, the first in silico model to predict the intravenous pharmacokinetics of dendrimers, a commonly explored drug vector, based on physicochemical properties. We have manually curated the largest relational database of dendrimer pharmacokinetic parameters and their structural/physicochemical properties. This was used to develop a machine learning-based model capable of accurately predicting pharmacokinetic parameters, including half-life, clearance, volume of distribution and dose recovered in the liver and urine. dendPoint successfully predicts dendrimer pharmacokinetic properties, achieving correlations of up to r = 0.83 and Q(2) up to 0.68. dendPoint is freely available as a user-friendly web-service and database at http://biosig.unimelb.edu.au/dendpoint. This platform is ultimately expected to be used to guide dendrimer construct design and refinement prior to embarking on more time consuming and expensive in vivo testing. Nature Publishing Group UK 2019-10-29 /pmc/articles/PMC6820739/ /pubmed/31664080 http://dx.doi.org/10.1038/s41598-019-51789-3 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Kaminskas, Lisa M. Pires, Douglas E. V. Ascher, David B. dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction |
title | dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction |
title_full | dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction |
title_fullStr | dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction |
title_full_unstemmed | dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction |
title_short | dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction |
title_sort | dendpoint: a web resource for dendrimer pharmacokinetics investigation and prediction |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820739/ https://www.ncbi.nlm.nih.gov/pubmed/31664080 http://dx.doi.org/10.1038/s41598-019-51789-3 |
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