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The SCOC database, a large, open, and global database with sediment community oxygen consumption rates

Sediment community oxygen consumption (SCOC) rates provide important information about biogeochemical processes in marine sediments and the activity of benthic microorganisms and fauna. Therefore, several databases of SCOC data have been compiled since the mid-1990s. However, these earlier databases...

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Autores principales: Stratmann, Tanja, Soetaert, Karline, Wei, Chih-Lin, Lin, Yu-Shih, van Oevelen, Dick
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820755/
https://www.ncbi.nlm.nih.gov/pubmed/31664032
http://dx.doi.org/10.1038/s41597-019-0259-3
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author Stratmann, Tanja
Soetaert, Karline
Wei, Chih-Lin
Lin, Yu-Shih
van Oevelen, Dick
author_facet Stratmann, Tanja
Soetaert, Karline
Wei, Chih-Lin
Lin, Yu-Shih
van Oevelen, Dick
author_sort Stratmann, Tanja
collection PubMed
description Sediment community oxygen consumption (SCOC) rates provide important information about biogeochemical processes in marine sediments and the activity of benthic microorganisms and fauna. Therefore, several databases of SCOC data have been compiled since the mid-1990s. However, these earlier databases contained much less data records and were not freely available. Additionally, the databases were not transparent in their selection procedure, so that other researchers could not assess the quality of the data. Here, we present the largest, best documented, and freely available database of SCOC data compiled to date. The database is comprised of 3,540 georeferenced SCOC records from 230 studies that were selected following the procedure for systematic reviews and meta-analyses. Each data record states whether the oxygen consumption was measured ex situ or in situ, as total oxygen uptake, diffusive or advective oxygen uptake, and which measurement device was used. The database will be curated and updated annually to secure and maintain an up-to-date global database of SCOC data.
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spelling pubmed-68207552019-11-07 The SCOC database, a large, open, and global database with sediment community oxygen consumption rates Stratmann, Tanja Soetaert, Karline Wei, Chih-Lin Lin, Yu-Shih van Oevelen, Dick Sci Data Data Descriptor Sediment community oxygen consumption (SCOC) rates provide important information about biogeochemical processes in marine sediments and the activity of benthic microorganisms and fauna. Therefore, several databases of SCOC data have been compiled since the mid-1990s. However, these earlier databases contained much less data records and were not freely available. Additionally, the databases were not transparent in their selection procedure, so that other researchers could not assess the quality of the data. Here, we present the largest, best documented, and freely available database of SCOC data compiled to date. The database is comprised of 3,540 georeferenced SCOC records from 230 studies that were selected following the procedure for systematic reviews and meta-analyses. Each data record states whether the oxygen consumption was measured ex situ or in situ, as total oxygen uptake, diffusive or advective oxygen uptake, and which measurement device was used. The database will be curated and updated annually to secure and maintain an up-to-date global database of SCOC data. Nature Publishing Group UK 2019-10-29 /pmc/articles/PMC6820755/ /pubmed/31664032 http://dx.doi.org/10.1038/s41597-019-0259-3 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Stratmann, Tanja
Soetaert, Karline
Wei, Chih-Lin
Lin, Yu-Shih
van Oevelen, Dick
The SCOC database, a large, open, and global database with sediment community oxygen consumption rates
title The SCOC database, a large, open, and global database with sediment community oxygen consumption rates
title_full The SCOC database, a large, open, and global database with sediment community oxygen consumption rates
title_fullStr The SCOC database, a large, open, and global database with sediment community oxygen consumption rates
title_full_unstemmed The SCOC database, a large, open, and global database with sediment community oxygen consumption rates
title_short The SCOC database, a large, open, and global database with sediment community oxygen consumption rates
title_sort scoc database, a large, open, and global database with sediment community oxygen consumption rates
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820755/
https://www.ncbi.nlm.nih.gov/pubmed/31664032
http://dx.doi.org/10.1038/s41597-019-0259-3
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