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SLR: a scaffolding algorithm based on long reads and contig classification
BACKGROUND: Scaffolding is an important step in genome assembly that orders and orients the contigs produced by assemblers. However, repetitive regions in contigs usually prevent scaffolding from producing accurate results. How to solve the problem of repetitive regions has received a great deal of...
Autores principales: | Luo, Junwei, Lyu, Mengna, Chen, Ranran, Zhang, Xiaohong, Luo, Huimin, Yan, Chaokun |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6820941/ https://www.ncbi.nlm.nih.gov/pubmed/31666010 http://dx.doi.org/10.1186/s12859-019-3114-9 |
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