Cargando…
multiPhATE: bioinformatics pipeline for functional annotation of phage isolates
SUMMARY: To address the need for improved phage annotation tools that scale, we created an automated throughput annotation pipeline: multiple-genome Phage Annotation Toolkit and Evaluator (multiPhATE). multiPhATE is a throughput pipeline driver that invokes an annotation pipeline (PhATE) across a us...
Autores principales: | Ecale Zhou, Carol L, Malfatti, Stephanie, Kimbrel, Jeffrey, Philipson, Casandra, McNair, Katelyn, Hamilton, Theron, Edwards, Robert, Souza, Brian |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6821344/ https://www.ncbi.nlm.nih.gov/pubmed/31086982 http://dx.doi.org/10.1093/bioinformatics/btz258 |
Ejemplares similares
-
MultiPhATE2: code for functional annotation and comparison of phage genomes
por: Ecale Zhou, Carol L, et al.
Publicado: (2021) -
Bioconductor toolchain for reproducible bioinformatics pipelines using Rcwl and RcwlPipelines
por: Hu, Qiang, et al.
Publicado: (2021) -
Utilizing Amino Acid Composition and Entropy of Potential Open Reading Frames to Identify Protein-Coding Genes
por: McNair, Katelyn, et al.
Publicado: (2021) -
DIYA: a bacterial annotation pipeline for any genomics lab
por: Stewart, Andrew C., et al.
Publicado: (2009) -
MetaSanity: an integrated microbial genome evaluation and annotation pipeline
por: Neely, Christopher J, et al.
Publicado: (2020)