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Conserved sequences identify the closest living relatives of primates

Elucidating the closest living relatives of extant primates is essential for fully understanding important biological processes related to the genomic and phenotypic evolution of primates, especially of humans. However, the phylogenetic placement of these primate relatives remains controversial, wit...

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Detalles Bibliográficos
Autores principales: Zhang, Mei-Ling, Li, Ming-Li, Ayoola, Adeola Oluwakemi, Murphy, Robert W., Wu, Dong-Dong, Shao, Yong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Science Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6822925/
https://www.ncbi.nlm.nih.gov/pubmed/31393097
http://dx.doi.org/10.24272/j.issn.2095-8137.2019.057
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author Zhang, Mei-Ling
Li, Ming-Li
Ayoola, Adeola Oluwakemi
Murphy, Robert W.
Wu, Dong-Dong
Shao, Yong
author_facet Zhang, Mei-Ling
Li, Ming-Li
Ayoola, Adeola Oluwakemi
Murphy, Robert W.
Wu, Dong-Dong
Shao, Yong
author_sort Zhang, Mei-Ling
collection PubMed
description Elucidating the closest living relatives of extant primates is essential for fully understanding important biological processes related to the genomic and phenotypic evolution of primates, especially of humans. However, the phylogenetic placement of these primate relatives remains controversial, with three primary hypotheses currently espoused based on morphological and molecular evidence. In the present study, we used two algorithms to analyze differently partitioned genomic datasets consisting of 45.4 Mb of conserved non-coding elements and 393 kb of concatenated coding sequences to test these hypotheses. We assessed different genomic histories and compared with other molecular studies found solid support for colugos being the closest living relatives of primates. Our phylogeny showed Cercopithecinae to have low levels of nucleotide divergence, especially for Papionini, and gibbons to have a high rate of divergence. The MCMCtree comprehensively updated divergence dates of early evolution of Primatomorpha and Primates.
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spelling pubmed-68229252020-03-03 Conserved sequences identify the closest living relatives of primates Zhang, Mei-Ling Li, Ming-Li Ayoola, Adeola Oluwakemi Murphy, Robert W. Wu, Dong-Dong Shao, Yong Zool Res Reports Elucidating the closest living relatives of extant primates is essential for fully understanding important biological processes related to the genomic and phenotypic evolution of primates, especially of humans. However, the phylogenetic placement of these primate relatives remains controversial, with three primary hypotheses currently espoused based on morphological and molecular evidence. In the present study, we used two algorithms to analyze differently partitioned genomic datasets consisting of 45.4 Mb of conserved non-coding elements and 393 kb of concatenated coding sequences to test these hypotheses. We assessed different genomic histories and compared with other molecular studies found solid support for colugos being the closest living relatives of primates. Our phylogeny showed Cercopithecinae to have low levels of nucleotide divergence, especially for Papionini, and gibbons to have a high rate of divergence. The MCMCtree comprehensively updated divergence dates of early evolution of Primatomorpha and Primates. Science Press 2019-08-06 2019-11-18 /pmc/articles/PMC6822925/ /pubmed/31393097 http://dx.doi.org/10.24272/j.issn.2095-8137.2019.057 Text en Editorial Office of Zoological Research, Kunming Institute of Zoology, Chinese Academy of Sciences This is an open-access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Reports
Zhang, Mei-Ling
Li, Ming-Li
Ayoola, Adeola Oluwakemi
Murphy, Robert W.
Wu, Dong-Dong
Shao, Yong
Conserved sequences identify the closest living relatives of primates
title Conserved sequences identify the closest living relatives of primates
title_full Conserved sequences identify the closest living relatives of primates
title_fullStr Conserved sequences identify the closest living relatives of primates
title_full_unstemmed Conserved sequences identify the closest living relatives of primates
title_short Conserved sequences identify the closest living relatives of primates
title_sort conserved sequences identify the closest living relatives of primates
topic Reports
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6822925/
https://www.ncbi.nlm.nih.gov/pubmed/31393097
http://dx.doi.org/10.24272/j.issn.2095-8137.2019.057
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