Cargando…

Theoretical Evaluation of Multi-Breed Genomic Prediction in Chinese Indigenous Cattle

SIMPLE SUMMARY: In order to evaluate the potential application of genomic selection (GS) for Chinese indigenous cattle, we assessed the influence of combining multiple populations on the reliability of genomic predictions for 10 indigenous breeds of Chinese cattle using simulated data. We found the...

Descripción completa

Detalles Bibliográficos
Autores principales:	Xu, Lei, Wang, Zezhao, Zhu, Bo, Liu, Ying, Li, Hongwei, Bordbar, Farhad, Chen, Yan, Zhang, Lupei, Gao, Xue, Gao, Huijiang, Zhang, Shengli, Xu, Lingyang, Li, Junya
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	MDPI 2019
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6827096/ https://www.ncbi.nlm.nih.gov/pubmed/31614691 http://dx.doi.org/10.3390/ani9100789

Ejemplares similares

Genome-Wide Scan Identifies Selection Signatures in Chinese Wagyu Cattle Using a High-Density SNP Array
por: Wang, Zezhao, et al.
Publicado: (2019)

Evaluation of Linkage Disequilibrium, Effective Population Size and Haplotype Block Structure in Chinese Cattle
por: Xu, Lei, et al.
Publicado: (2019)

Identification of muscle-specific candidate genes in Simmental beef cattle using imputed next generation sequencing
por: Bordbar, Farhad, et al.
Publicado: (2019)

Genome wide association study identifies SNPs associated with fatty acid composition in Chinese Wagyu cattle
por: Wang, Zezhao, et al.
Publicado: (2019)

Incorporating Genome Annotation Into Genomic Prediction for Carcass Traits in Chinese Simmental Beef Cattle
por: Xu, Ling, et al.
Publicado: (2020)

Genomic Prediction and Association Analysis with Models Including Dominance Effects for Important Traits in Chinese Simmental Beef Cattle
por: Liu, Ying, et al.
Publicado: (2019)

Genome-Wide Assessment of Runs of Homozygosity in Chinese Wagyu Beef Cattle
por: Zhao, Guoyao, et al.
Publicado: (2020)

Validation of the Prediction Accuracy for 13 Traits in Chinese Simmental Beef Cattle Using a Preselected Low-Density SNP Panel
por: Xu, Ling, et al.
Publicado: (2021)

Genome-wide scan reveals genetic divergence and diverse adaptive selection in Chinese local cattle
por: Xu, Lingyang, et al.
Publicado: (2019)

Genome-wide assessment of genetic diversity and population structure insights into admixture and introgression in Chinese indigenous cattle
por: Zhang, Wengang, et al.
Publicado: (2018)

Identification and validation of a novel candidate gene regulating net meat weight in Simmental beef cattle based on imputed next‐generation sequencing
por: Bordbar, Farhad, et al.
Publicado: (2020)

Runs of homozygosity analysis reveals consensus homozygous regions affecting production traits in Chinese Simmental beef cattle
por: Zhao, Guoyao, et al.
Publicado: (2021)

Genomic Prediction Using LD-Based Haplotypes Inferred From High-Density Chip and Imputed Sequence Variants in Chinese Simmental Beef Cattle
por: Li, Hongwei, et al.
Publicado: (2021)

Genomic prediction of carcass traits using different haplotype block partitioning methods in beef cattle
por: Li, Hongwei, et al.
Publicado: (2022)

Weighted Single-Step Genome-Wide Association Study for Growth Traits in Chinese Simmental Beef Cattle
por: Zhuang, Zhanwei, et al.
Publicado: (2020)

Genomic Patterns of Homozygosity in Chinese Local Cattle
por: Xu, Lingyang, et al.
Publicado: (2019)

Identification of Candidate Variants Associated With Bone Weight Using Whole Genome Sequence in Beef Cattle
por: Niu, Qunhao, et al.
Publicado: (2021)

Assessing the Genetic Background and Selection Signatures of Huaxi Cattle Using High-Density SNP Array
por: Ma, Jun, et al.
Publicado: (2021)

Genomic prediction with parallel computing for slaughter traits in Chinese Simmental beef cattle using high-density genotypes
por: Guo, Peng, et al.
Publicado: (2017)

The eQTL colocalization and transcriptome-wide association study identify potentially causal genes responsible for economic traits in Simmental beef cattle
por: Cai, Wentao, et al.
Publicado: (2023)

Identification of Candidate Genes Regulating Carcass Depth and Hind Leg Circumference in Simmental Beef Cattle Using Illumina Bovine Beadchip and Next-Generation Sequencing Analyses
por: Bordbar, Farhad, et al.
Publicado: (2022)

Genome wide association study and genomic prediction for fatty acid composition in Chinese Simmental beef cattle using high density SNP array
por: Zhu, Bo, et al.
Publicado: (2017)

Evaluation of GBLUP, BayesB and elastic net for genomic prediction in Chinese Simmental beef cattle
por: Wang, Xiaoqiao, et al.
Publicado: (2019)

Genome-Wide Association Analysis of Growth Curve Parameters in Chinese Simmental Beef Cattle
por: Duan, Xinghai, et al.
Publicado: (2021)

Multi-strategy genome-wide association studies identify the DCAF16-NCAPG region as a susceptibility locus for average daily gain in cattle
por: Zhang, Wengang, et al.
Publicado: (2016)

PCA-Based Multiple-Trait GWAS Analysis: A Powerful Model for Exploring Pleiotropy
por: Zhang, Wengang, et al.
Publicado: (2018)

Genome-Wide Association Study Based on Random Regression Model Reveals Candidate Genes Associated with Longitudinal Data in Chinese Simmental Beef Cattle
por: Du, Lili, et al.
Publicado: (2021)

Evaluation of Linear Programming and Optimal Contribution Selection Approaches for Long-Term Selection on Beef Cattle Breeding
por: Zheng, Xu, et al.
Publicado: (2023)

Fast genomic prediction of breeding values using parallel Markov chain Monte Carlo with convergence diagnosis
por: Guo, Peng, et al.
Publicado: (2018)

The Impact of Variable Degrees of Freedom and Scale Parameters in Bayesian Methods for Genomic Prediction in Chinese Simmental Beef Cattle
por: Zhu, Bo, et al.
Publicado: (2016)

Transcriptome profiling analysis of muscle tissue reveals potential candidate genes affecting water holding capacity in Chinese Simmental beef cattle
por: Du, Lili, et al.
Publicado: (2021)

Transcriptional atlas analysis from multiple tissues reveals the expression specificity patterns in beef cattle
por: Zhang, Tianliu, et al.
Publicado: (2022)

Probe-based association analysis identifies several deletions associated with average daily gain in beef cattle
por: Xu, Lingyang, et al.
Publicado: (2019)

Genome-wide analysis reveals differential selection involved with copy number variation in diverse Chinese Cattle
por: Yang, Liu, et al.
Publicado: (2017)

Genome-Wide Association Study Reveals the PLAG1 Gene for Knuckle, Biceps and Shank Weight in Simmental Beef Cattle
por: Song, Yuxin, et al.
Publicado: (2016)

Transcriptional states and chromatin accessibility during bovine myoblasts proliferation and myogenic differentiation
por: Li, Qian, et al.
Publicado: (2022)

Comparative Transcriptome Analyses of Gayal (Bos frontalis), Yak (Bos grunniens), and Cattle (Bos taurus) Reveal the High-Altitude Adaptation
por: Ma, Jun, et al.
Publicado: (2022)

Cis-eQTL Analysis and Functional Validation of Candidate Genes for Carcass Yield Traits in Beef Cattle
por: Wang, Tianzhen, et al.
Publicado: (2022)

Transcriptomics and Lipid Metabolomics Analysis of Subcutaneous, Visceral, and Abdominal Adipose Tissues of Beef Cattle
por: Du, Lili, et al.
Publicado: (2022)

Searching for new loci and candidate genes for economically important traits through gene-based association analysis of Simmental cattle
por: Xia, Jiangwei, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_jvke7187fsfb9n26hrfr1lgkhs