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Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine

The title imidazo[1,2-a] pyridine derivative, C(13)H(8)Br(2)N(2), was synthesized via a single-step reaction method. The title mol­ecule is planar, showing a dihedral angle of 0.62 (17)° between the phenyl and the imidazo[1,2-a] pyridine rings. An intra­molecular C—H⋯N hydrogen bond with an S(5) rin...

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Autores principales: Khamees, Hussien Ahmed, Chaluvaiah, Kumara, El-khatatneh, Nasseem Ahmed, Swamynayaka, Ananda, Chong, Kwong Huey, Dasappa, Jagadeesh Prasad, Madegowda, Mahendra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6829731/
https://www.ncbi.nlm.nih.gov/pubmed/31709079
http://dx.doi.org/10.1107/S2056989019013410
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author Khamees, Hussien Ahmed
Chaluvaiah, Kumara
El-khatatneh, Nasseem Ahmed
Swamynayaka, Ananda
Chong, Kwong Huey
Dasappa, Jagadeesh Prasad
Madegowda, Mahendra
author_facet Khamees, Hussien Ahmed
Chaluvaiah, Kumara
El-khatatneh, Nasseem Ahmed
Swamynayaka, Ananda
Chong, Kwong Huey
Dasappa, Jagadeesh Prasad
Madegowda, Mahendra
author_sort Khamees, Hussien Ahmed
collection PubMed
description The title imidazo[1,2-a] pyridine derivative, C(13)H(8)Br(2)N(2), was synthesized via a single-step reaction method. The title mol­ecule is planar, showing a dihedral angle of 0.62 (17)° between the phenyl and the imidazo[1,2-a] pyridine rings. An intra­molecular C—H⋯N hydrogen bond with an S(5) ring motif is present. In the crystal, a short H⋯H contact links adjacent mol­ecules into inversion-related dimers. The dimers are linked in turn by weak C—H⋯π and slipped π–π stacking inter­actions, forming layers parallel to (110). The layers are connected into a three-dimensional network by short Br⋯H contacts. Two-dimensional fingerprint plots and three-dimensional Hirshfeld surface analysis of the inter­molecular contacts reveal that the most important contributions for the crystal packing are from H⋯Br/Br⋯H (26.1%), H⋯H (21.7%), H⋯C/C⋯H (21.3%) and C⋯C (6.5%) inter­actions. Energy framework calculations suggest that the contacts formed between mol­ecules are largely dispersive in nature. Analysis of HOMO–LUMO energies from a DFT calculation reveals the pure π character of the aromatic rings with the highest electron density on the phenyl ring, and σ character of the electron density on the Br atoms. The HOMO–LUMO gap was found to be 4.343 eV.
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spelling pubmed-68297312019-11-08 Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine Khamees, Hussien Ahmed Chaluvaiah, Kumara El-khatatneh, Nasseem Ahmed Swamynayaka, Ananda Chong, Kwong Huey Dasappa, Jagadeesh Prasad Madegowda, Mahendra Acta Crystallogr E Crystallogr Commun Research Communications The title imidazo[1,2-a] pyridine derivative, C(13)H(8)Br(2)N(2), was synthesized via a single-step reaction method. The title mol­ecule is planar, showing a dihedral angle of 0.62 (17)° between the phenyl and the imidazo[1,2-a] pyridine rings. An intra­molecular C—H⋯N hydrogen bond with an S(5) ring motif is present. In the crystal, a short H⋯H contact links adjacent mol­ecules into inversion-related dimers. The dimers are linked in turn by weak C—H⋯π and slipped π–π stacking inter­actions, forming layers parallel to (110). The layers are connected into a three-dimensional network by short Br⋯H contacts. Two-dimensional fingerprint plots and three-dimensional Hirshfeld surface analysis of the inter­molecular contacts reveal that the most important contributions for the crystal packing are from H⋯Br/Br⋯H (26.1%), H⋯H (21.7%), H⋯C/C⋯H (21.3%) and C⋯C (6.5%) inter­actions. Energy framework calculations suggest that the contacts formed between mol­ecules are largely dispersive in nature. Analysis of HOMO–LUMO energies from a DFT calculation reveals the pure π character of the aromatic rings with the highest electron density on the phenyl ring, and σ character of the electron density on the Br atoms. The HOMO–LUMO gap was found to be 4.343 eV. International Union of Crystallography 2019-10-03 /pmc/articles/PMC6829731/ /pubmed/31709079 http://dx.doi.org/10.1107/S2056989019013410 Text en © Khamees et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Khamees, Hussien Ahmed
Chaluvaiah, Kumara
El-khatatneh, Nasseem Ahmed
Swamynayaka, Ananda
Chong, Kwong Huey
Dasappa, Jagadeesh Prasad
Madegowda, Mahendra
Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine
title Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine
title_full Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine
title_fullStr Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine
title_full_unstemmed Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine
title_short Crystal structure, DFT calculation, Hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine
title_sort crystal structure, dft calculation, hirshfeld surface analysis and energy framework study of 6-bromo-2-(4-bromo­phen­yl)imidazo[1,2-a]pyridine
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6829731/
https://www.ncbi.nlm.nih.gov/pubmed/31709079
http://dx.doi.org/10.1107/S2056989019013410
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