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DISCOVER: A facile structure-based screening method for vinyl compound producing microbes

Here we report a novel structure-based microbial screening method for vinyl compound discovery, DISCOVER (direct screening method based on coupling reactions for vinyl compound producers). Through a two-step screening procedure based on selective coupling reactions of terminal alkenes, the thiol-ene...

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Autores principales: Aso, Yuji, Sano, Mei, Kuroda, Hikari, Ohara, Hitomi, Ando, Hiroshi, Matsumoto, Keiji
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6831603/
https://www.ncbi.nlm.nih.gov/pubmed/31690766
http://dx.doi.org/10.1038/s41598-019-52518-6
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author Aso, Yuji
Sano, Mei
Kuroda, Hikari
Ohara, Hitomi
Ando, Hiroshi
Matsumoto, Keiji
author_facet Aso, Yuji
Sano, Mei
Kuroda, Hikari
Ohara, Hitomi
Ando, Hiroshi
Matsumoto, Keiji
author_sort Aso, Yuji
collection PubMed
description Here we report a novel structure-based microbial screening method for vinyl compound discovery, DISCOVER (direct screening method based on coupling reactions for vinyl compound producers). Through a two-step screening procedure based on selective coupling reactions of terminal alkenes, the thiol-ene reaction (1(st) step of screening) and Mizoroki-Heck reaction, followed by iodine test (2(nd) step of screening), microbes producing vinyl compounds like itaconic acid (IA) can be isolated from soil samples. In the 1(st) step of screening, soil sources are plated on agar medium supplemented with an antimicrobial agent, α-thioglycerol (TG), and a radical initiator, VA-044 (VA). In the 2(nd) step of screening, vinyl compounds produced in the cultures are labelled with iodobenzene via the Mizoroki-Heck reaction, followed by an iodine test, leading to the detection and characterisation of labelled products. We evaluated the validity of DISCOVER using IA and its producer Aspergillus terreus. Experimental data supported our hypothesis that IA reacts with TG in the medium via the thiol-ene reaction and consequently, A. terreus rapidly forms colonies on the agar medium because of the loss of the antimicrobial activity of TG. Using DISCOVER, high throughput and selective isolation of A. terreus strains producing IA was possible from soils.
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spelling pubmed-68316032019-11-13 DISCOVER: A facile structure-based screening method for vinyl compound producing microbes Aso, Yuji Sano, Mei Kuroda, Hikari Ohara, Hitomi Ando, Hiroshi Matsumoto, Keiji Sci Rep Article Here we report a novel structure-based microbial screening method for vinyl compound discovery, DISCOVER (direct screening method based on coupling reactions for vinyl compound producers). Through a two-step screening procedure based on selective coupling reactions of terminal alkenes, the thiol-ene reaction (1(st) step of screening) and Mizoroki-Heck reaction, followed by iodine test (2(nd) step of screening), microbes producing vinyl compounds like itaconic acid (IA) can be isolated from soil samples. In the 1(st) step of screening, soil sources are plated on agar medium supplemented with an antimicrobial agent, α-thioglycerol (TG), and a radical initiator, VA-044 (VA). In the 2(nd) step of screening, vinyl compounds produced in the cultures are labelled with iodobenzene via the Mizoroki-Heck reaction, followed by an iodine test, leading to the detection and characterisation of labelled products. We evaluated the validity of DISCOVER using IA and its producer Aspergillus terreus. Experimental data supported our hypothesis that IA reacts with TG in the medium via the thiol-ene reaction and consequently, A. terreus rapidly forms colonies on the agar medium because of the loss of the antimicrobial activity of TG. Using DISCOVER, high throughput and selective isolation of A. terreus strains producing IA was possible from soils. Nature Publishing Group UK 2019-11-05 /pmc/articles/PMC6831603/ /pubmed/31690766 http://dx.doi.org/10.1038/s41598-019-52518-6 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Aso, Yuji
Sano, Mei
Kuroda, Hikari
Ohara, Hitomi
Ando, Hiroshi
Matsumoto, Keiji
DISCOVER: A facile structure-based screening method for vinyl compound producing microbes
title DISCOVER: A facile structure-based screening method for vinyl compound producing microbes
title_full DISCOVER: A facile structure-based screening method for vinyl compound producing microbes
title_fullStr DISCOVER: A facile structure-based screening method for vinyl compound producing microbes
title_full_unstemmed DISCOVER: A facile structure-based screening method for vinyl compound producing microbes
title_short DISCOVER: A facile structure-based screening method for vinyl compound producing microbes
title_sort discover: a facile structure-based screening method for vinyl compound producing microbes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6831603/
https://www.ncbi.nlm.nih.gov/pubmed/31690766
http://dx.doi.org/10.1038/s41598-019-52518-6
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