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Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis

Circular RNAs (circRNAs) are emerging as a novel, yet powerful player in many human diseases. They are involved in several cellular processes and are becoming a noteworthy type of biomarkers. Among other functions, circRNAs can serve as RNA sponges or as scaffolds for RNA-binding proteins. Here, we...

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Autores principales: Dolinar, Ana, Koritnik, Blaž, Glavač, Damjan, Ravnik-Glavač, Metka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6834740/
https://www.ncbi.nlm.nih.gov/pubmed/31175544
http://dx.doi.org/10.1007/s12035-019-1627-x
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author Dolinar, Ana
Koritnik, Blaž
Glavač, Damjan
Ravnik-Glavač, Metka
author_facet Dolinar, Ana
Koritnik, Blaž
Glavač, Damjan
Ravnik-Glavač, Metka
author_sort Dolinar, Ana
collection PubMed
description Circular RNAs (circRNAs) are emerging as a novel, yet powerful player in many human diseases. They are involved in several cellular processes and are becoming a noteworthy type of biomarkers. Among other functions, circRNAs can serve as RNA sponges or as scaffolds for RNA-binding proteins. Here, we investigated a microarray expression profile of circRNAs in leukocyte samples from ALS patients and age- and sex-matched healthy controls to identify differentially expressed circRNAs. We selected 10 of them for a qPCR validation of expression on a larger set of samples, identification of their associations with clinical parameters, and evaluation of their diagnostic potential. In total, expression of 7/10 circRNAs was significant in a larger cohort of ALS patients, compared with age- and sex-matched healthy controls. Three of them (hsa_circ_0023919, hsa_circ_0063411, and hsa_circ_0088036) showed the same regulation as in microarray results. These three circRNAs also had AUC > 0.95, and sensitivity and specificity for the optimal threshold point > 90%, showing their potential for using them as diagnostic biomarkers.
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spelling pubmed-68347402019-11-20 Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis Dolinar, Ana Koritnik, Blaž Glavač, Damjan Ravnik-Glavač, Metka Mol Neurobiol Article Circular RNAs (circRNAs) are emerging as a novel, yet powerful player in many human diseases. They are involved in several cellular processes and are becoming a noteworthy type of biomarkers. Among other functions, circRNAs can serve as RNA sponges or as scaffolds for RNA-binding proteins. Here, we investigated a microarray expression profile of circRNAs in leukocyte samples from ALS patients and age- and sex-matched healthy controls to identify differentially expressed circRNAs. We selected 10 of them for a qPCR validation of expression on a larger set of samples, identification of their associations with clinical parameters, and evaluation of their diagnostic potential. In total, expression of 7/10 circRNAs was significant in a larger cohort of ALS patients, compared with age- and sex-matched healthy controls. Three of them (hsa_circ_0023919, hsa_circ_0063411, and hsa_circ_0088036) showed the same regulation as in microarray results. These three circRNAs also had AUC > 0.95, and sensitivity and specificity for the optimal threshold point > 90%, showing their potential for using them as diagnostic biomarkers. Springer US 2019-06-07 2019 /pmc/articles/PMC6834740/ /pubmed/31175544 http://dx.doi.org/10.1007/s12035-019-1627-x Text en © The Author(s) 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Dolinar, Ana
Koritnik, Blaž
Glavač, Damjan
Ravnik-Glavač, Metka
Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis
title Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis
title_full Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis
title_fullStr Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis
title_full_unstemmed Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis
title_short Circular RNAs as Potential Blood Biomarkers in Amyotrophic Lateral Sclerosis
title_sort circular rnas as potential blood biomarkers in amyotrophic lateral sclerosis
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6834740/
https://www.ncbi.nlm.nih.gov/pubmed/31175544
http://dx.doi.org/10.1007/s12035-019-1627-x
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