Cargando…
Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus
The transcriptomes of the venom glands of two individuals of the magician’s cone, Pionoconus magus, from Okinawa (Japan) were sequenced, assembled, and annotated. In addition, RNA-seq raw reads available at the SRA database from one additional specimen of P. magus from the Philippines were also asse...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6835573/ https://www.ncbi.nlm.nih.gov/pubmed/31569823 http://dx.doi.org/10.3390/md17100553 |
_version_ | 1783466704273145856 |
---|---|
author | Pardos-Blas, José R. Irisarri, Iker Abalde, Samuel Tenorio, Manuel J. Zardoya, Rafael |
author_facet | Pardos-Blas, José R. Irisarri, Iker Abalde, Samuel Tenorio, Manuel J. Zardoya, Rafael |
author_sort | Pardos-Blas, José R. |
collection | PubMed |
description | The transcriptomes of the venom glands of two individuals of the magician’s cone, Pionoconus magus, from Okinawa (Japan) were sequenced, assembled, and annotated. In addition, RNA-seq raw reads available at the SRA database from one additional specimen of P. magus from the Philippines were also assembled and annotated. The total numbers of identified conotoxin precursors and hormones per specimen were 118, 112, and 93. The three individuals shared only five identical sequences whereas the two specimens from Okinawa had 30 sequences in common. The total number of distinct conotoxin precursors and hormones for P. magus was 275, and were assigned to 53 conotoxin precursor and hormone superfamilies, two of which were new based on their divergent signal region. The superfamilies that had the highest number of precursors were M (42), O1 (34), T (27), A (18), O2 (17), and F (13), accounting for 55% of the total diversity. The D superfamily, previously thought to be exclusive of vermivorous cones was found in P. magus and contained a highly divergent mature region. Similarly, the A superfamily alpha 4/3 was found in P. magus despite the fact that it was previously postulated to be almost exclusive of the genus Rhombiconus. Differential expression analyses of P. magus compared to Chelyconus ermineus, the only fish-hunting cone from the Atlantic Ocean revealed that M and A2 superfamilies appeared to be more expressed in the former whereas the O2 superfamily was more expressed in the latter. |
format | Online Article Text |
id | pubmed-6835573 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-68355732019-11-25 Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus Pardos-Blas, José R. Irisarri, Iker Abalde, Samuel Tenorio, Manuel J. Zardoya, Rafael Mar Drugs Article The transcriptomes of the venom glands of two individuals of the magician’s cone, Pionoconus magus, from Okinawa (Japan) were sequenced, assembled, and annotated. In addition, RNA-seq raw reads available at the SRA database from one additional specimen of P. magus from the Philippines were also assembled and annotated. The total numbers of identified conotoxin precursors and hormones per specimen were 118, 112, and 93. The three individuals shared only five identical sequences whereas the two specimens from Okinawa had 30 sequences in common. The total number of distinct conotoxin precursors and hormones for P. magus was 275, and were assigned to 53 conotoxin precursor and hormone superfamilies, two of which were new based on their divergent signal region. The superfamilies that had the highest number of precursors were M (42), O1 (34), T (27), A (18), O2 (17), and F (13), accounting for 55% of the total diversity. The D superfamily, previously thought to be exclusive of vermivorous cones was found in P. magus and contained a highly divergent mature region. Similarly, the A superfamily alpha 4/3 was found in P. magus despite the fact that it was previously postulated to be almost exclusive of the genus Rhombiconus. Differential expression analyses of P. magus compared to Chelyconus ermineus, the only fish-hunting cone from the Atlantic Ocean revealed that M and A2 superfamilies appeared to be more expressed in the former whereas the O2 superfamily was more expressed in the latter. MDPI 2019-09-27 /pmc/articles/PMC6835573/ /pubmed/31569823 http://dx.doi.org/10.3390/md17100553 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Pardos-Blas, José R. Irisarri, Iker Abalde, Samuel Tenorio, Manuel J. Zardoya, Rafael Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus |
title | Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus |
title_full | Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus |
title_fullStr | Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus |
title_full_unstemmed | Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus |
title_short | Conotoxin Diversity in the Venom Gland Transcriptome of the Magician’s Cone, Pionoconus magus |
title_sort | conotoxin diversity in the venom gland transcriptome of the magician’s cone, pionoconus magus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6835573/ https://www.ncbi.nlm.nih.gov/pubmed/31569823 http://dx.doi.org/10.3390/md17100553 |
work_keys_str_mv | AT pardosblasjoser conotoxindiversityinthevenomglandtranscriptomeofthemagiciansconepionoconusmagus AT irisarriiker conotoxindiversityinthevenomglandtranscriptomeofthemagiciansconepionoconusmagus AT abaldesamuel conotoxindiversityinthevenomglandtranscriptomeofthemagiciansconepionoconusmagus AT tenoriomanuelj conotoxindiversityinthevenomglandtranscriptomeofthemagiciansconepionoconusmagus AT zardoyarafael conotoxindiversityinthevenomglandtranscriptomeofthemagiciansconepionoconusmagus |