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Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
BACKGROUND: Genetic factors, dysregulation in the endocrine system, cytokine and paracrine factors are implicated in the pathogenesis of familial short stature (FSS). Nowadays, the treatment choice for FSS is limited, with only recombinant human growth hormone (rhGH) being available. METHODS: Herein...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6836357/ https://www.ncbi.nlm.nih.gov/pubmed/31699087 http://dx.doi.org/10.1186/s12929-019-0581-2 |
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author | Wong, Henry Sung-Ching Lin, Ying-Ju Lu, Hsing-Fang Liao, Wen-Ling Chen, Chien-Hsiun Wu, Jer-Yuarn Chang, Wei-Chiao Tsai, Fuu-Jen |
author_facet | Wong, Henry Sung-Ching Lin, Ying-Ju Lu, Hsing-Fang Liao, Wen-Ling Chen, Chien-Hsiun Wu, Jer-Yuarn Chang, Wei-Chiao Tsai, Fuu-Jen |
author_sort | Wong, Henry Sung-Ching |
collection | PubMed |
description | BACKGROUND: Genetic factors, dysregulation in the endocrine system, cytokine and paracrine factors are implicated in the pathogenesis of familial short stature (FSS). Nowadays, the treatment choice for FSS is limited, with only recombinant human growth hormone (rhGH) being available. METHODS: Herein, starting from the identification of 122 genetic loci related to FSS, we adopted a genetic-driven drug discovery bioinformatics pipeline based on functional annotation to prioritize crucial biological FSS-related genes. These genes were suggested to be potential targets for therapeutics. RESULTS: We discovered five druggable subnetworks, which contained seven FSS-related genes and 17 druggable targerts. CONCLUSIONS: This study provides a valuable drug repositioning accompanied by corresponding targetable gene clusters for FSS therapy. |
format | Online Article Text |
id | pubmed-6836357 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-68363572019-11-08 Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning Wong, Henry Sung-Ching Lin, Ying-Ju Lu, Hsing-Fang Liao, Wen-Ling Chen, Chien-Hsiun Wu, Jer-Yuarn Chang, Wei-Chiao Tsai, Fuu-Jen J Biomed Sci Research BACKGROUND: Genetic factors, dysregulation in the endocrine system, cytokine and paracrine factors are implicated in the pathogenesis of familial short stature (FSS). Nowadays, the treatment choice for FSS is limited, with only recombinant human growth hormone (rhGH) being available. METHODS: Herein, starting from the identification of 122 genetic loci related to FSS, we adopted a genetic-driven drug discovery bioinformatics pipeline based on functional annotation to prioritize crucial biological FSS-related genes. These genes were suggested to be potential targets for therapeutics. RESULTS: We discovered five druggable subnetworks, which contained seven FSS-related genes and 17 druggable targerts. CONCLUSIONS: This study provides a valuable drug repositioning accompanied by corresponding targetable gene clusters for FSS therapy. BioMed Central 2019-11-07 /pmc/articles/PMC6836357/ /pubmed/31699087 http://dx.doi.org/10.1186/s12929-019-0581-2 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Wong, Henry Sung-Ching Lin, Ying-Ju Lu, Hsing-Fang Liao, Wen-Ling Chen, Chien-Hsiun Wu, Jer-Yuarn Chang, Wei-Chiao Tsai, Fuu-Jen Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning |
title | Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning |
title_full | Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning |
title_fullStr | Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning |
title_full_unstemmed | Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning |
title_short | Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning |
title_sort | genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6836357/ https://www.ncbi.nlm.nih.gov/pubmed/31699087 http://dx.doi.org/10.1186/s12929-019-0581-2 |
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