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Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning

BACKGROUND: Genetic factors, dysregulation in the endocrine system, cytokine and paracrine factors are implicated in the pathogenesis of familial short stature (FSS). Nowadays, the treatment choice for FSS is limited, with only recombinant human growth hormone (rhGH) being available. METHODS: Herein...

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Autores principales: Wong, Henry Sung-Ching, Lin, Ying-Ju, Lu, Hsing-Fang, Liao, Wen-Ling, Chen, Chien-Hsiun, Wu, Jer-Yuarn, Chang, Wei-Chiao, Tsai, Fuu-Jen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6836357/
https://www.ncbi.nlm.nih.gov/pubmed/31699087
http://dx.doi.org/10.1186/s12929-019-0581-2
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author Wong, Henry Sung-Ching
Lin, Ying-Ju
Lu, Hsing-Fang
Liao, Wen-Ling
Chen, Chien-Hsiun
Wu, Jer-Yuarn
Chang, Wei-Chiao
Tsai, Fuu-Jen
author_facet Wong, Henry Sung-Ching
Lin, Ying-Ju
Lu, Hsing-Fang
Liao, Wen-Ling
Chen, Chien-Hsiun
Wu, Jer-Yuarn
Chang, Wei-Chiao
Tsai, Fuu-Jen
author_sort Wong, Henry Sung-Ching
collection PubMed
description BACKGROUND: Genetic factors, dysregulation in the endocrine system, cytokine and paracrine factors are implicated in the pathogenesis of familial short stature (FSS). Nowadays, the treatment choice for FSS is limited, with only recombinant human growth hormone (rhGH) being available. METHODS: Herein, starting from the identification of 122 genetic loci related to FSS, we adopted a genetic-driven drug discovery bioinformatics pipeline based on functional annotation to prioritize crucial biological FSS-related genes. These genes were suggested to be potential targets for therapeutics. RESULTS: We discovered five druggable subnetworks, which contained seven FSS-related genes and 17 druggable targerts. CONCLUSIONS: This study provides a valuable drug repositioning accompanied by corresponding targetable gene clusters for FSS therapy.
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spelling pubmed-68363572019-11-08 Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning Wong, Henry Sung-Ching Lin, Ying-Ju Lu, Hsing-Fang Liao, Wen-Ling Chen, Chien-Hsiun Wu, Jer-Yuarn Chang, Wei-Chiao Tsai, Fuu-Jen J Biomed Sci Research BACKGROUND: Genetic factors, dysregulation in the endocrine system, cytokine and paracrine factors are implicated in the pathogenesis of familial short stature (FSS). Nowadays, the treatment choice for FSS is limited, with only recombinant human growth hormone (rhGH) being available. METHODS: Herein, starting from the identification of 122 genetic loci related to FSS, we adopted a genetic-driven drug discovery bioinformatics pipeline based on functional annotation to prioritize crucial biological FSS-related genes. These genes were suggested to be potential targets for therapeutics. RESULTS: We discovered five druggable subnetworks, which contained seven FSS-related genes and 17 druggable targerts. CONCLUSIONS: This study provides a valuable drug repositioning accompanied by corresponding targetable gene clusters for FSS therapy. BioMed Central 2019-11-07 /pmc/articles/PMC6836357/ /pubmed/31699087 http://dx.doi.org/10.1186/s12929-019-0581-2 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Wong, Henry Sung-Ching
Lin, Ying-Ju
Lu, Hsing-Fang
Liao, Wen-Ling
Chen, Chien-Hsiun
Wu, Jer-Yuarn
Chang, Wei-Chiao
Tsai, Fuu-Jen
Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
title Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
title_full Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
title_fullStr Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
title_full_unstemmed Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
title_short Genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
title_sort genomic interrogation of familial short stature contributes to the discovery of the pathophysiological mechanisms and pharmaceutical drug repositioning
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6836357/
https://www.ncbi.nlm.nih.gov/pubmed/31699087
http://dx.doi.org/10.1186/s12929-019-0581-2
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