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Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus
Abstract. The study presents data on the karyotype characteristics, features of chromosomal polymorphism and the gene COI sequences of Chironomus heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus. We found 8 banding sequences in the Caucasian population. Overall, The Cauc...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Pensoft Publishers
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6838217/ https://www.ncbi.nlm.nih.gov/pubmed/31723376 http://dx.doi.org/10.3897/CompCytogen.v13i4.35572 |
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author | Karmokov, Mukhamed Kh. |
author_facet | Karmokov, Mukhamed Kh. |
author_sort | Karmokov, Mukhamed Kh. |
collection | PubMed |
description | Abstract. The study presents data on the karyotype characteristics, features of chromosomal polymorphism and the gene COI sequences of Chironomus heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus. We found 8 banding sequences in the Caucasian population. Overall, The Caucasian population of the species can be characterized as having a low level of polymorphism. We found one new banding sequence hpiA2 in the banding sequence pool of Ch. heteropilicornis. We observed inversion polymorphism only in the arm F. The dendrogram of genetic distances by Nei criteria (1972) shows a clear separation of the Caucasian population from populations of Siberia. At the same time, the distance between populations of Siberia and the population of South Caucasus (0.379–0.445) almost reach the mean distance (0.474 ± 0.314) between subspecies (Gunderina 2001). Due to this, we can assume that the population of South Caucasus separated from Siberian populations at the level of subspecies. Constructed on data for COI gene sequences the phylogenetic tree estimated by the Bayesian inference shows that the sequences of Ch. heteropilicornis from the South Caucasus form a separate line in the general branch of Ch. heteropilicornis sequences. At the same time, calculated K2P genetic distances between Ch. heteropilicornis sequences from Norway and Caucasus (2.0–2.2%) do not exceed the 3% threshold for the genus Chironomus. |
format | Online Article Text |
id | pubmed-6838217 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-68382172019-11-13 Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus Karmokov, Mukhamed Kh. Comp Cytogenet Research Article Abstract. The study presents data on the karyotype characteristics, features of chromosomal polymorphism and the gene COI sequences of Chironomus heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus. We found 8 banding sequences in the Caucasian population. Overall, The Caucasian population of the species can be characterized as having a low level of polymorphism. We found one new banding sequence hpiA2 in the banding sequence pool of Ch. heteropilicornis. We observed inversion polymorphism only in the arm F. The dendrogram of genetic distances by Nei criteria (1972) shows a clear separation of the Caucasian population from populations of Siberia. At the same time, the distance between populations of Siberia and the population of South Caucasus (0.379–0.445) almost reach the mean distance (0.474 ± 0.314) between subspecies (Gunderina 2001). Due to this, we can assume that the population of South Caucasus separated from Siberian populations at the level of subspecies. Constructed on data for COI gene sequences the phylogenetic tree estimated by the Bayesian inference shows that the sequences of Ch. heteropilicornis from the South Caucasus form a separate line in the general branch of Ch. heteropilicornis sequences. At the same time, calculated K2P genetic distances between Ch. heteropilicornis sequences from Norway and Caucasus (2.0–2.2%) do not exceed the 3% threshold for the genus Chironomus. Pensoft Publishers 2019-10-31 /pmc/articles/PMC6838217/ /pubmed/31723376 http://dx.doi.org/10.3897/CompCytogen.v13i4.35572 Text en Mukhamed Kh. Karmokov http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Karmokov, Mukhamed Kh. Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus |
title | Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus
heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus |
title_full | Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus
heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus |
title_fullStr | Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus
heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus |
title_full_unstemmed | Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus
heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus |
title_short | Karyotype characteristics, chromosomal polymorphism and gene COI sequences of Chironomus
heteropilicornis Wülker, 1996 (Diptera, Chironomidae) from the South Caucasus |
title_sort | karyotype characteristics, chromosomal polymorphism and gene coi sequences of chironomus
heteropilicornis wülker, 1996 (diptera, chironomidae) from the south caucasus |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6838217/ https://www.ncbi.nlm.nih.gov/pubmed/31723376 http://dx.doi.org/10.3897/CompCytogen.v13i4.35572 |
work_keys_str_mv | AT karmokovmukhamedkh karyotypecharacteristicschromosomalpolymorphismandgenecoisequencesofchironomusheteropilicorniswulker1996dipterachironomidaefromthesouthcaucasus |