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De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters

Interest in harvesting potential benefits from microalgae renders it necessary to have the many ecological niches of a single species to be investigated. This dataset comprises de novo whole genome assembly of two mangrove-isolated microalgae (from division Chlorophyta); Chlorella vulgaris UMT-M1 an...

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Autores principales: Teh, Kit Yinn, Afifudeen, C.L.Wan, Aziz, Ahmad, Wong, Li Lian, Loh, Saw Hong, Cha, Thye San
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6838400/
https://www.ncbi.nlm.nih.gov/pubmed/31720332
http://dx.doi.org/10.1016/j.dib.2019.104680
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author Teh, Kit Yinn
Afifudeen, C.L.Wan
Aziz, Ahmad
Wong, Li Lian
Loh, Saw Hong
Cha, Thye San
author_facet Teh, Kit Yinn
Afifudeen, C.L.Wan
Aziz, Ahmad
Wong, Li Lian
Loh, Saw Hong
Cha, Thye San
author_sort Teh, Kit Yinn
collection PubMed
description Interest in harvesting potential benefits from microalgae renders it necessary to have the many ecological niches of a single species to be investigated. This dataset comprises de novo whole genome assembly of two mangrove-isolated microalgae (from division Chlorophyta); Chlorella vulgaris UMT-M1 and Messastrum gracile SE-MC4 from Universiti Malaysia Terengganu, Malaysia. Library runs were carried out with 2 × 150 base paired-ends reads, whereas sequencing was conducted using Illumina Novaseq 2500 platform. Sequencing yielded raw reads amounting to ∼11 Gb in total bases for both species and was further assembled de novo. Genome assembly resulted in a 50.15 Mbp and 60.83 Mbp genome size for UMT-M1 and SE-MC4, respectively. All filtered and assembled genomic data sequences have been submitted to National Centre for Biotechnology Information (NCBI) and can be located at DDBJ/ENA/GenBank under the accession of VJNP00000000 (UMT-M1) and VIYE00000000 (SE-MC4).
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spelling pubmed-68384002019-11-12 De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters Teh, Kit Yinn Afifudeen, C.L.Wan Aziz, Ahmad Wong, Li Lian Loh, Saw Hong Cha, Thye San Data Brief Agricultural and Biological Science Interest in harvesting potential benefits from microalgae renders it necessary to have the many ecological niches of a single species to be investigated. This dataset comprises de novo whole genome assembly of two mangrove-isolated microalgae (from division Chlorophyta); Chlorella vulgaris UMT-M1 and Messastrum gracile SE-MC4 from Universiti Malaysia Terengganu, Malaysia. Library runs were carried out with 2 × 150 base paired-ends reads, whereas sequencing was conducted using Illumina Novaseq 2500 platform. Sequencing yielded raw reads amounting to ∼11 Gb in total bases for both species and was further assembled de novo. Genome assembly resulted in a 50.15 Mbp and 60.83 Mbp genome size for UMT-M1 and SE-MC4, respectively. All filtered and assembled genomic data sequences have been submitted to National Centre for Biotechnology Information (NCBI) and can be located at DDBJ/ENA/GenBank under the accession of VJNP00000000 (UMT-M1) and VIYE00000000 (SE-MC4). Elsevier 2019-10-18 /pmc/articles/PMC6838400/ /pubmed/31720332 http://dx.doi.org/10.1016/j.dib.2019.104680 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Agricultural and Biological Science
Teh, Kit Yinn
Afifudeen, C.L.Wan
Aziz, Ahmad
Wong, Li Lian
Loh, Saw Hong
Cha, Thye San
De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters
title De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters
title_full De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters
title_fullStr De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters
title_full_unstemmed De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters
title_short De novo whole genome sequencing data of two mangrove-isolated microalgae from Terengganu coastal waters
title_sort de novo whole genome sequencing data of two mangrove-isolated microalgae from terengganu coastal waters
topic Agricultural and Biological Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6838400/
https://www.ncbi.nlm.nih.gov/pubmed/31720332
http://dx.doi.org/10.1016/j.dib.2019.104680
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