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DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions

Cell shapes and connectivities evolve over time as the colony changes shape or embryos develop. Shapes of intercellular interfaces are closely coupled with the forces resulting from actomyosin interactions, membrane tension, or cell-cell adhesions. Although it is possible to computationally infer ce...

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Detalles Bibliográficos
Autores principales: Vasan, Ritvik, Maleckar, Mary M., Williams, C. David, Rangamani, Padmini
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Biophysical Society 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6838938/
https://www.ncbi.nlm.nih.gov/pubmed/31648791
http://dx.doi.org/10.1016/j.bpj.2019.09.034
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author Vasan, Ritvik
Maleckar, Mary M.
Williams, C. David
Rangamani, Padmini
author_facet Vasan, Ritvik
Maleckar, Mary M.
Williams, C. David
Rangamani, Padmini
author_sort Vasan, Ritvik
collection PubMed
description Cell shapes and connectivities evolve over time as the colony changes shape or embryos develop. Shapes of intercellular interfaces are closely coupled with the forces resulting from actomyosin interactions, membrane tension, or cell-cell adhesions. Although it is possible to computationally infer cell-cell forces from a mechanical model of collective cell behavior, doing so for temporally evolving forces in a manner robust to digitization difficulties is challenging. Here, we introduce a method for dynamic local intercellular tension estimation (DLITE) that infers such evolution in temporal force with less sensitivity to digitization ambiguities or errors. This method builds upon previous work on single time points (cellular force-inference toolkit). We validate our method using synthetic geometries. DLITE’s inferred cell colony tension evolutions correlate better with ground truth for these synthetic geometries as compared to tension values inferred from methods that consider each time point in isolation. We introduce cell connectivity errors, angle estimate errors, connection mislocalization, and connection topological changes to synthetic data and show that DLITE has reduced sensitivity to these conditions. Finally, we apply DLITE to time series of human-induced pluripotent stem cell colonies with endogenously expressed GFP-tagged zonulae occludentes-1. We show that DLITE offers improved stability in the inference of cell-cell tensions and supports a correlation between the dynamics of cell-cell forces and colony rearrangement.
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spelling pubmed-68389382020-10-10 DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions Vasan, Ritvik Maleckar, Mary M. Williams, C. David Rangamani, Padmini Biophys J Articles Cell shapes and connectivities evolve over time as the colony changes shape or embryos develop. Shapes of intercellular interfaces are closely coupled with the forces resulting from actomyosin interactions, membrane tension, or cell-cell adhesions. Although it is possible to computationally infer cell-cell forces from a mechanical model of collective cell behavior, doing so for temporally evolving forces in a manner robust to digitization difficulties is challenging. Here, we introduce a method for dynamic local intercellular tension estimation (DLITE) that infers such evolution in temporal force with less sensitivity to digitization ambiguities or errors. This method builds upon previous work on single time points (cellular force-inference toolkit). We validate our method using synthetic geometries. DLITE’s inferred cell colony tension evolutions correlate better with ground truth for these synthetic geometries as compared to tension values inferred from methods that consider each time point in isolation. We introduce cell connectivity errors, angle estimate errors, connection mislocalization, and connection topological changes to synthetic data and show that DLITE has reduced sensitivity to these conditions. Finally, we apply DLITE to time series of human-induced pluripotent stem cell colonies with endogenously expressed GFP-tagged zonulae occludentes-1. We show that DLITE offers improved stability in the inference of cell-cell tensions and supports a correlation between the dynamics of cell-cell forces and colony rearrangement. The Biophysical Society 2019-11-05 2019-10-07 /pmc/articles/PMC6838938/ /pubmed/31648791 http://dx.doi.org/10.1016/j.bpj.2019.09.034 Text en © 2019 Biophysical Society. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Articles
Vasan, Ritvik
Maleckar, Mary M.
Williams, C. David
Rangamani, Padmini
DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions
title DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions
title_full DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions
title_fullStr DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions
title_full_unstemmed DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions
title_short DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions
title_sort dlite uses cell-cell interface movement to better infer cell-cell tensions
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6838938/
https://www.ncbi.nlm.nih.gov/pubmed/31648791
http://dx.doi.org/10.1016/j.bpj.2019.09.034
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