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TRANSCRIPTOMIC AGING IN THE HRS

Since age related perturbations in gene expression profiles have been described and transcriptomic changes in specific biological pathways have been implicated in the aging process, we performed whole transcriptome sequencing on 4000 HRS participants using RNA obtained from Paxgene tubes collected d...

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Autor principal: Thyagarajan, Bharat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6840166/
http://dx.doi.org/10.1093/geroni/igz038.1612
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author Thyagarajan, Bharat
author_facet Thyagarajan, Bharat
author_sort Thyagarajan, Bharat
collection PubMed
description Since age related perturbations in gene expression profiles have been described and transcriptomic changes in specific biological pathways have been implicated in the aging process, we performed whole transcriptome sequencing on 4000 HRS participants using RNA obtained from Paxgene tubes collected during the 2016 interview. We will describe design and implementation of innovative quality control procedures to minimize technical variability in transcriptomic measurements and monitor analytical variation in large population studies such as HRS. We will also report the distribution of transcriptomic profiles according to various demographic characteristics (age, sex, racial/ethnic and socioeconomic differences) and describe the prevalence of previously reported aging related transcriptomic signatures in HRS. We will describe the associations between transcriptomic profiles and other measures of biological aging in HRS and report how changes in cell composition can affect transcriptomic profiles observed in population studies such as HRS.
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spelling pubmed-68401662019-11-13 TRANSCRIPTOMIC AGING IN THE HRS Thyagarajan, Bharat Innov Aging Session 2260 (Symposium) Since age related perturbations in gene expression profiles have been described and transcriptomic changes in specific biological pathways have been implicated in the aging process, we performed whole transcriptome sequencing on 4000 HRS participants using RNA obtained from Paxgene tubes collected during the 2016 interview. We will describe design and implementation of innovative quality control procedures to minimize technical variability in transcriptomic measurements and monitor analytical variation in large population studies such as HRS. We will also report the distribution of transcriptomic profiles according to various demographic characteristics (age, sex, racial/ethnic and socioeconomic differences) and describe the prevalence of previously reported aging related transcriptomic signatures in HRS. We will describe the associations between transcriptomic profiles and other measures of biological aging in HRS and report how changes in cell composition can affect transcriptomic profiles observed in population studies such as HRS. Oxford University Press 2019-11-08 /pmc/articles/PMC6840166/ http://dx.doi.org/10.1093/geroni/igz038.1612 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of The Gerontological Society of America. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Session 2260 (Symposium)
Thyagarajan, Bharat
TRANSCRIPTOMIC AGING IN THE HRS
title TRANSCRIPTOMIC AGING IN THE HRS
title_full TRANSCRIPTOMIC AGING IN THE HRS
title_fullStr TRANSCRIPTOMIC AGING IN THE HRS
title_full_unstemmed TRANSCRIPTOMIC AGING IN THE HRS
title_short TRANSCRIPTOMIC AGING IN THE HRS
title_sort transcriptomic aging in the hrs
topic Session 2260 (Symposium)
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6840166/
http://dx.doi.org/10.1093/geroni/igz038.1612
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