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GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES
African killifishes independently evolved annual life cycles at least three times, offering a unique natural experiment of diversification of life history strategies. Using a comprehensive whole-genome sampling of 46 species of African killifishes, we found that genome size correlates with annual li...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6840883/ http://dx.doi.org/10.1093/geroni/igz038.027 |
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author | Valenzano, Dario Riccardo Cui, Rongfeng |
author_facet | Valenzano, Dario Riccardo Cui, Rongfeng |
author_sort | Valenzano, Dario Riccardo |
collection | PubMed |
description | African killifishes independently evolved annual life cycles at least three times, offering a unique natural experiment of diversification of life history strategies. Using a comprehensive whole-genome sampling of 46 species of African killifishes, we found that genome size correlates with annual life style and climate. Annual species underwent genome-wide expansion of transposable elements, higher gene family turn-over rates and relaxed selection in genes in known aging pathways, such as mitochondrial replication and translation, mTOR pathway and DNA repair. Whole-genome resequencing in wild Nothobranchius populations showed bottle-necks and a genome-wide signature of relaxation of selection in populations evolved in dryer climates. In conclusion, evolution in ephemeral environments in African killifishes caused an extensive relaxation of selective constraints at genome-wide level. We discovered that, in African killifishes, ecology drove the evolution of short life span, associated to tens of thousands of slightly deleterious mutations driven to intermediate to high frequencies. |
format | Online Article Text |
id | pubmed-6840883 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-68408832019-11-15 GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES Valenzano, Dario Riccardo Cui, Rongfeng Innov Aging Session 525 (Symposium) African killifishes independently evolved annual life cycles at least three times, offering a unique natural experiment of diversification of life history strategies. Using a comprehensive whole-genome sampling of 46 species of African killifishes, we found that genome size correlates with annual life style and climate. Annual species underwent genome-wide expansion of transposable elements, higher gene family turn-over rates and relaxed selection in genes in known aging pathways, such as mitochondrial replication and translation, mTOR pathway and DNA repair. Whole-genome resequencing in wild Nothobranchius populations showed bottle-necks and a genome-wide signature of relaxation of selection in populations evolved in dryer climates. In conclusion, evolution in ephemeral environments in African killifishes caused an extensive relaxation of selective constraints at genome-wide level. We discovered that, in African killifishes, ecology drove the evolution of short life span, associated to tens of thousands of slightly deleterious mutations driven to intermediate to high frequencies. Oxford University Press 2019-11-08 /pmc/articles/PMC6840883/ http://dx.doi.org/10.1093/geroni/igz038.027 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of The Gerontological Society of America. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Session 525 (Symposium) Valenzano, Dario Riccardo Cui, Rongfeng GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES |
title | GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES |
title_full | GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES |
title_fullStr | GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES |
title_full_unstemmed | GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES |
title_short | GENOME-WIDE RELAXATION OF SELECTIVE CONSTRAINTS UNDERLIES THE EVOLUTION OF SHORT LIFE SPAN IN AFRICAN KILLIFISHES |
title_sort | genome-wide relaxation of selective constraints underlies the evolution of short life span in african killifishes |
topic | Session 525 (Symposium) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6840883/ http://dx.doi.org/10.1093/geroni/igz038.027 |
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