Cargando…

Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma

BACKGROUND: Kinesin family member 18B (KIF18B) is a member of the kinesin-8 superfamily, and functions as an oncogene in human cancers. However, its expression profile and role in lung adenocarcinoma (LUAD) remain unclear. MATERIALS AND METHODS: We examined the expression profile of KIF18B using qua...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhong, Yonglong, Jiang, Lingyu, Long, Xiaomao, Zhou, Yifan, Deng, Shen, Lin, Hui, Li, Xiangwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Dove 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6842302/
https://www.ncbi.nlm.nih.gov/pubmed/31807007
http://dx.doi.org/10.2147/OTT.S227438
_version_ 1783468027199619072
author Zhong, Yonglong
Jiang, Lingyu
Long, Xiaomao
Zhou, Yifan
Deng, Shen
Lin, Hui
Li, Xiangwei
author_facet Zhong, Yonglong
Jiang, Lingyu
Long, Xiaomao
Zhou, Yifan
Deng, Shen
Lin, Hui
Li, Xiangwei
author_sort Zhong, Yonglong
collection PubMed
description BACKGROUND: Kinesin family member 18B (KIF18B) is a member of the kinesin-8 superfamily, and functions as an oncogene in human cancers. However, its expression profile and role in lung adenocarcinoma (LUAD) remain unclear. MATERIALS AND METHODS: We examined the expression profile of KIF18B using quantitative real-time reverse transcription polymerase chain reaction and immunohistochemistry in fresh clinical samples. Using data downloaded from the Cancer Genome Atlas database and Gene Expression Omnibus, we explored the clinical significance of KIF18B, potential mechanisms of its dysregulation and its underlying biological function in LUAD. RESULTS: KIF18B was significantly over-expressed in LUAD tissues relative to normal tissues. High KIF18B expression was associated with smoking history, positive nodal invasion, advanced clinical stage, death status and poorer prognosis. Cox regression analyses revealed that KIF18B overexpression was an independent prognostic biomarker for poor overall survival (OS) and recurrence-free survival in LUAD. In addition, KIF18B mutation was observed in 2.2% of LUAD cases. DNA copy number variation was correlated with upregulated expression of KIF18B in LUAD tissues and cell lines. The methylation level of some KIF18B DNA CpG sites was negatively associated with its mRNA expression. KIF18B was predictively targeted by miR-125a-5p, which was downregulated in LUAD tissues, inversely correlated with KIF18B mRNA expression and significantly associated with poor OS. Furthermore, gene set enrichment analysis revealed that genes positively co-expressed with KIF18B were mainly enriched in cell cycle signaling pathways. CONCLUSION: Our results indicate that KIF18B is a promising prognostic biomarker for LUAD. DNA amplification, hypomethylation as well as miR-125a-5p downregulation may be involved in the mechanism of KIF18B dysregulation in LUAD. KIF18B might function as a novel oncogene through cell cycle regulation pathways in LUAD.
format Online
Article
Text
id pubmed-6842302
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Dove
record_format MEDLINE/PubMed
spelling pubmed-68423022019-12-05 Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma Zhong, Yonglong Jiang, Lingyu Long, Xiaomao Zhou, Yifan Deng, Shen Lin, Hui Li, Xiangwei Onco Targets Ther Original Research BACKGROUND: Kinesin family member 18B (KIF18B) is a member of the kinesin-8 superfamily, and functions as an oncogene in human cancers. However, its expression profile and role in lung adenocarcinoma (LUAD) remain unclear. MATERIALS AND METHODS: We examined the expression profile of KIF18B using quantitative real-time reverse transcription polymerase chain reaction and immunohistochemistry in fresh clinical samples. Using data downloaded from the Cancer Genome Atlas database and Gene Expression Omnibus, we explored the clinical significance of KIF18B, potential mechanisms of its dysregulation and its underlying biological function in LUAD. RESULTS: KIF18B was significantly over-expressed in LUAD tissues relative to normal tissues. High KIF18B expression was associated with smoking history, positive nodal invasion, advanced clinical stage, death status and poorer prognosis. Cox regression analyses revealed that KIF18B overexpression was an independent prognostic biomarker for poor overall survival (OS) and recurrence-free survival in LUAD. In addition, KIF18B mutation was observed in 2.2% of LUAD cases. DNA copy number variation was correlated with upregulated expression of KIF18B in LUAD tissues and cell lines. The methylation level of some KIF18B DNA CpG sites was negatively associated with its mRNA expression. KIF18B was predictively targeted by miR-125a-5p, which was downregulated in LUAD tissues, inversely correlated with KIF18B mRNA expression and significantly associated with poor OS. Furthermore, gene set enrichment analysis revealed that genes positively co-expressed with KIF18B were mainly enriched in cell cycle signaling pathways. CONCLUSION: Our results indicate that KIF18B is a promising prognostic biomarker for LUAD. DNA amplification, hypomethylation as well as miR-125a-5p downregulation may be involved in the mechanism of KIF18B dysregulation in LUAD. KIF18B might function as a novel oncogene through cell cycle regulation pathways in LUAD. Dove 2019-11-05 /pmc/articles/PMC6842302/ /pubmed/31807007 http://dx.doi.org/10.2147/OTT.S227438 Text en © 2019 Zhong et al. http://creativecommons.org/licenses/by-nc/3.0/ This work is published and licensed by Dove Medical Press Limited. The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed. For permission for commercial use of this work, please see paragraphs 4.2 and 5 of our Terms (https://www.dovepress.com/terms.php).
spellingShingle Original Research
Zhong, Yonglong
Jiang, Lingyu
Long, Xiaomao
Zhou, Yifan
Deng, Shen
Lin, Hui
Li, Xiangwei
Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma
title Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma
title_full Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma
title_fullStr Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma
title_full_unstemmed Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma
title_short Clinical Significance And Integrative Analysis Of Kinesin Family Member 18B In Lung Adenocarcinoma
title_sort clinical significance and integrative analysis of kinesin family member 18b in lung adenocarcinoma
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6842302/
https://www.ncbi.nlm.nih.gov/pubmed/31807007
http://dx.doi.org/10.2147/OTT.S227438
work_keys_str_mv AT zhongyonglong clinicalsignificanceandintegrativeanalysisofkinesinfamilymember18binlungadenocarcinoma
AT jianglingyu clinicalsignificanceandintegrativeanalysisofkinesinfamilymember18binlungadenocarcinoma
AT longxiaomao clinicalsignificanceandintegrativeanalysisofkinesinfamilymember18binlungadenocarcinoma
AT zhouyifan clinicalsignificanceandintegrativeanalysisofkinesinfamilymember18binlungadenocarcinoma
AT dengshen clinicalsignificanceandintegrativeanalysisofkinesinfamilymember18binlungadenocarcinoma
AT linhui clinicalsignificanceandintegrativeanalysisofkinesinfamilymember18binlungadenocarcinoma
AT lixiangwei clinicalsignificanceandintegrativeanalysisofkinesinfamilymember18binlungadenocarcinoma