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Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer
Introduction: Accumulating evidence showed that a large number of microRNAs (miRNAs) are abnormally expressed in lung cancer tissues and play critical roles in cancer development and progression. The aim of this study is to identify the differentially expressed miRNAs (DEMs) between non-small cell l...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Ivyspring International Publisher
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6843868/ https://www.ncbi.nlm.nih.gov/pubmed/31737116 http://dx.doi.org/10.7150/jca.30336 |
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author | Chen, Bo Gao, Tianshun Yuan, Weiwei Zhao, Weihong Wang, Tza-Huei Wu, Jianqing |
author_facet | Chen, Bo Gao, Tianshun Yuan, Weiwei Zhao, Weihong Wang, Tza-Huei Wu, Jianqing |
author_sort | Chen, Bo |
collection | PubMed |
description | Introduction: Accumulating evidence showed that a large number of microRNAs (miRNAs) are abnormally expressed in lung cancer tissues and play critical roles in cancer development and progression. The aim of this study is to identify the differentially expressed miRNAs (DEMs) between non-small cell lung cancer (NSCLC) and normal lung tissues, and evaluate the prognostic value and potential target gene functional enrichment of the DEMs. Materials and Methods: We first downloaded the high-throughput miRNA data from The Cancer Genome Atlas Project (TCGA) database, and subsequently analyzed the data using bioinformatics analysis including limma package in R, Kaplan-Meier curve and Log-rank method, and several online analysis tools. Results: A total of 125 DEMs and 138 DEMs were respectively identified in lung adenocarcinoma (LUAD) tissues and lung squamous cell carcinoma (LUSC) tissues compared with their matched normal tissues. Moreover, we found that the prognostic function of the eight miRNAs (miR-375, miR-148a, miR-29b-1 and miR-584 for LUAD; miR-4746, miR-326, miR-93 and miR-671 for LUSC). Furthermore, the two four-miRNA signatures were constructed and found to be an independent prognostic factor for LUAD and LUSC patients, respectively. Additionally, our results indicated that the target genes of eight miRNAs may be involved in various pathways related to NSCLC, including PI3K-Akt, TGF-beta, FoxO, Ras, GPI-anchor biosynthesis and metabolic, Rap1, HIF-1 and proteasome. Conclusion: Overall, eight miRNAs were closely correlated with survival of NSCLC patients, and the constructed two four-miRNA signatures could be respectively used as prognostic markers in LUAD and LUSC patients. |
format | Online Article Text |
id | pubmed-6843868 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-68438682019-11-15 Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer Chen, Bo Gao, Tianshun Yuan, Weiwei Zhao, Weihong Wang, Tza-Huei Wu, Jianqing J Cancer Research Paper Introduction: Accumulating evidence showed that a large number of microRNAs (miRNAs) are abnormally expressed in lung cancer tissues and play critical roles in cancer development and progression. The aim of this study is to identify the differentially expressed miRNAs (DEMs) between non-small cell lung cancer (NSCLC) and normal lung tissues, and evaluate the prognostic value and potential target gene functional enrichment of the DEMs. Materials and Methods: We first downloaded the high-throughput miRNA data from The Cancer Genome Atlas Project (TCGA) database, and subsequently analyzed the data using bioinformatics analysis including limma package in R, Kaplan-Meier curve and Log-rank method, and several online analysis tools. Results: A total of 125 DEMs and 138 DEMs were respectively identified in lung adenocarcinoma (LUAD) tissues and lung squamous cell carcinoma (LUSC) tissues compared with their matched normal tissues. Moreover, we found that the prognostic function of the eight miRNAs (miR-375, miR-148a, miR-29b-1 and miR-584 for LUAD; miR-4746, miR-326, miR-93 and miR-671 for LUSC). Furthermore, the two four-miRNA signatures were constructed and found to be an independent prognostic factor for LUAD and LUSC patients, respectively. Additionally, our results indicated that the target genes of eight miRNAs may be involved in various pathways related to NSCLC, including PI3K-Akt, TGF-beta, FoxO, Ras, GPI-anchor biosynthesis and metabolic, Rap1, HIF-1 and proteasome. Conclusion: Overall, eight miRNAs were closely correlated with survival of NSCLC patients, and the constructed two four-miRNA signatures could be respectively used as prognostic markers in LUAD and LUSC patients. Ivyspring International Publisher 2019-10-06 /pmc/articles/PMC6843868/ /pubmed/31737116 http://dx.doi.org/10.7150/jca.30336 Text en © The author(s) This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/). See http://ivyspring.com/terms for full terms and conditions. |
spellingShingle | Research Paper Chen, Bo Gao, Tianshun Yuan, Weiwei Zhao, Weihong Wang, Tza-Huei Wu, Jianqing Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer |
title | Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer |
title_full | Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer |
title_fullStr | Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer |
title_full_unstemmed | Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer |
title_short | Prognostic Value of Survival of MicroRNAs Signatures in Non-small Cell Lung Cancer |
title_sort | prognostic value of survival of micrornas signatures in non-small cell lung cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6843868/ https://www.ncbi.nlm.nih.gov/pubmed/31737116 http://dx.doi.org/10.7150/jca.30336 |
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