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AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH
Prior work has suggested that metabolic disorders increase the risk for cognitive decline. Further, studies have identified amino acids (AAs) as potential biomarkers for dementia and diabetes. This study examines AAs and metabolic clinical markers (MCM) as predictors of cognition (Processing Speed (...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6845137/ http://dx.doi.org/10.1093/geroni/igz038.3456 |
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author | Alwerdt, Jessie Tian, Yuan Patterson, Andrew D Sliwinski, Martin |
author_facet | Alwerdt, Jessie Tian, Yuan Patterson, Andrew D Sliwinski, Martin |
author_sort | Alwerdt, Jessie |
collection | PubMed |
description | Prior work has suggested that metabolic disorders increase the risk for cognitive decline. Further, studies have identified amino acids (AAs) as potential biomarkers for dementia and diabetes. This study examines AAs and metabolic clinical markers (MCM) as predictors of cognition (Processing Speed (SOP), Working Memory (WM), Fluid (Gf) and Crystallized Intelligence (Gc)). The sample included 241 middle-aged adults from Bronx, NY. Predictors included age, gender, education, ethnicity, smoking, having diabetes, glucose, insulin, triglycerides, diastolic, and systolic blood pressure (BP), and cholesterol. AAs and associated derivatives were obtained from serum using NMR-based metabolomics. Analyses were conducted for each cognitive domain using repeated cross-validation random forests and lasso regressions. Overall, all models had acceptable cross-validation mean squared error except for WM. Several MCMs were specific to each cognitive domain, such as lower triglycerides and glucose associated with better SOP and higher systolic BP associated with better Gc while none were identified for Gf. The Gf model had the least number of AAs with lower serine associated with better FI. Two AAs, higher histidine and alanine, were associated with better SOP. Further, higher alanine, valine, isoleucine, serine, methionine, betaine, and moderate tyrosine were associated with better Gc. These results indicate that AAs were specific to each cognitive domain and ranked similar or higher in importance as several MCMs These results suggest that further investigation of AAs alongside associated MCMs is needed to assess the metabolic contribution to cognitive performance. Such research will help identify specific metabolic targets relating to cognition. |
format | Online Article Text |
id | pubmed-6845137 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-68451372019-11-18 AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH Alwerdt, Jessie Tian, Yuan Patterson, Andrew D Sliwinski, Martin Innov Aging Session Lb3620 (Late Breaking Poster) Prior work has suggested that metabolic disorders increase the risk for cognitive decline. Further, studies have identified amino acids (AAs) as potential biomarkers for dementia and diabetes. This study examines AAs and metabolic clinical markers (MCM) as predictors of cognition (Processing Speed (SOP), Working Memory (WM), Fluid (Gf) and Crystallized Intelligence (Gc)). The sample included 241 middle-aged adults from Bronx, NY. Predictors included age, gender, education, ethnicity, smoking, having diabetes, glucose, insulin, triglycerides, diastolic, and systolic blood pressure (BP), and cholesterol. AAs and associated derivatives were obtained from serum using NMR-based metabolomics. Analyses were conducted for each cognitive domain using repeated cross-validation random forests and lasso regressions. Overall, all models had acceptable cross-validation mean squared error except for WM. Several MCMs were specific to each cognitive domain, such as lower triglycerides and glucose associated with better SOP and higher systolic BP associated with better Gc while none were identified for Gf. The Gf model had the least number of AAs with lower serine associated with better FI. Two AAs, higher histidine and alanine, were associated with better SOP. Further, higher alanine, valine, isoleucine, serine, methionine, betaine, and moderate tyrosine were associated with better Gc. These results indicate that AAs were specific to each cognitive domain and ranked similar or higher in importance as several MCMs These results suggest that further investigation of AAs alongside associated MCMs is needed to assess the metabolic contribution to cognitive performance. Such research will help identify specific metabolic targets relating to cognition. Oxford University Press 2019-11-08 /pmc/articles/PMC6845137/ http://dx.doi.org/10.1093/geroni/igz038.3456 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of The Gerontological Society of America. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Session Lb3620 (Late Breaking Poster) Alwerdt, Jessie Tian, Yuan Patterson, Andrew D Sliwinski, Martin AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH |
title | AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH |
title_full | AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH |
title_fullStr | AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH |
title_full_unstemmed | AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH |
title_short | AMINO ACIDS PREDICT COGNITION BEYOND CLINICAL METABOLIC MARKERS: A MACHINE LEARNING APPROACH |
title_sort | amino acids predict cognition beyond clinical metabolic markers: a machine learning approach |
topic | Session Lb3620 (Late Breaking Poster) |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6845137/ http://dx.doi.org/10.1093/geroni/igz038.3456 |
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