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A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm
Mineral identification using machine learning requires a significant amount of training data. We built a library of 2D hyperspectral images of minerals. The library contains reflectance images of 130 samples, of 76 distinct minerals, with more than 3.9 million data points. In order to produce this d...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6848079/ https://www.ncbi.nlm.nih.gov/pubmed/31712558 http://dx.doi.org/10.1038/s41597-019-0261-9 |
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author | Fasnacht, Laurent Vogt, Marie-Louise Renard, Philippe Brunner, Philip |
author_facet | Fasnacht, Laurent Vogt, Marie-Louise Renard, Philippe Brunner, Philip |
author_sort | Fasnacht, Laurent |
collection | PubMed |
description | Mineral identification using machine learning requires a significant amount of training data. We built a library of 2D hyperspectral images of minerals. The library contains reflectance images of 130 samples, of 76 distinct minerals, with more than 3.9 million data points. In order to produce this dataset, various well-characterized mineral samples were scanned, using a SPECIM Short Wave Infrared (SWIR) camera, which captures wavelengths from 900 to 2500 nm. Minerals were selected to represent all the mineral classes and the most common mineral occurrences. For each sample, the following data are provided: (a) At least one hyperspectral image of the sample, consisting of 256 wavelengths between 900 and 2500 nm. The raw data, the high dynamic range (HDR) image, and the masked HDR image are provided for each scan (each of them in HDF5 format). (b) A text file describing the sample, providing supplementary information for the subsequent analysis (c) RGB images (JPEG files) and automated 3D reconstructions (Stanford Triangle PLY files). These data help the user to visualize and understand specific sample characteristics. 2D hyperspectral images were produced for each mineral, which consist of many different spectra with high diversity. The scans feature similar spectra than the ones in other available spectral libraries. An artificial neural network was trained to demonstrate the high quality of the dataset. This spectral library is mainly aimed at training machine learning algorithms, such as neural networks, but can be also used as validation data for other types of classification algorithms. |
format | Online Article Text |
id | pubmed-6848079 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68480792019-11-14 A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm Fasnacht, Laurent Vogt, Marie-Louise Renard, Philippe Brunner, Philip Sci Data Data Descriptor Mineral identification using machine learning requires a significant amount of training data. We built a library of 2D hyperspectral images of minerals. The library contains reflectance images of 130 samples, of 76 distinct minerals, with more than 3.9 million data points. In order to produce this dataset, various well-characterized mineral samples were scanned, using a SPECIM Short Wave Infrared (SWIR) camera, which captures wavelengths from 900 to 2500 nm. Minerals were selected to represent all the mineral classes and the most common mineral occurrences. For each sample, the following data are provided: (a) At least one hyperspectral image of the sample, consisting of 256 wavelengths between 900 and 2500 nm. The raw data, the high dynamic range (HDR) image, and the masked HDR image are provided for each scan (each of them in HDF5 format). (b) A text file describing the sample, providing supplementary information for the subsequent analysis (c) RGB images (JPEG files) and automated 3D reconstructions (Stanford Triangle PLY files). These data help the user to visualize and understand specific sample characteristics. 2D hyperspectral images were produced for each mineral, which consist of many different spectra with high diversity. The scans feature similar spectra than the ones in other available spectral libraries. An artificial neural network was trained to demonstrate the high quality of the dataset. This spectral library is mainly aimed at training machine learning algorithms, such as neural networks, but can be also used as validation data for other types of classification algorithms. Nature Publishing Group UK 2019-11-11 /pmc/articles/PMC6848079/ /pubmed/31712558 http://dx.doi.org/10.1038/s41597-019-0261-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article. |
spellingShingle | Data Descriptor Fasnacht, Laurent Vogt, Marie-Louise Renard, Philippe Brunner, Philip A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm |
title | A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm |
title_full | A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm |
title_fullStr | A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm |
title_full_unstemmed | A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm |
title_short | A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm |
title_sort | 2d hyperspectral library of mineral reflectance, from 900 to 2500 nm |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6848079/ https://www.ncbi.nlm.nih.gov/pubmed/31712558 http://dx.doi.org/10.1038/s41597-019-0261-9 |
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