Cargando…

A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm

Mineral identification using machine learning requires a significant amount of training data. We built a library of 2D hyperspectral images of minerals. The library contains reflectance images of 130 samples, of 76 distinct minerals, with more than 3.9 million data points. In order to produce this d...

Descripción completa

Detalles Bibliográficos
Autores principales: Fasnacht, Laurent, Vogt, Marie-Louise, Renard, Philippe, Brunner, Philip
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6848079/
https://www.ncbi.nlm.nih.gov/pubmed/31712558
http://dx.doi.org/10.1038/s41597-019-0261-9
_version_ 1783469016294096896
author Fasnacht, Laurent
Vogt, Marie-Louise
Renard, Philippe
Brunner, Philip
author_facet Fasnacht, Laurent
Vogt, Marie-Louise
Renard, Philippe
Brunner, Philip
author_sort Fasnacht, Laurent
collection PubMed
description Mineral identification using machine learning requires a significant amount of training data. We built a library of 2D hyperspectral images of minerals. The library contains reflectance images of 130 samples, of 76 distinct minerals, with more than 3.9 million data points. In order to produce this dataset, various well-characterized mineral samples were scanned, using a SPECIM Short Wave Infrared (SWIR) camera, which captures wavelengths from 900 to 2500 nm. Minerals were selected to represent all the mineral classes and the most common mineral occurrences. For each sample, the following data are provided: (a) At least one hyperspectral image of the sample, consisting of 256 wavelengths between 900 and 2500 nm. The raw data, the high dynamic range (HDR) image, and the masked HDR image are provided for each scan (each of them in HDF5 format). (b) A text file describing the sample, providing supplementary information for the subsequent analysis (c) RGB images (JPEG files) and automated 3D reconstructions (Stanford Triangle PLY files). These data help the user to visualize and understand specific sample characteristics. 2D hyperspectral images were produced for each mineral, which consist of many different spectra with high diversity. The scans feature similar spectra than the ones in other available spectral libraries. An artificial neural network was trained to demonstrate the high quality of the dataset. This spectral library is mainly aimed at training machine learning algorithms, such as neural networks, but can be also used as validation data for other types of classification algorithms.
format Online
Article
Text
id pubmed-6848079
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-68480792019-11-14 A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm Fasnacht, Laurent Vogt, Marie-Louise Renard, Philippe Brunner, Philip Sci Data Data Descriptor Mineral identification using machine learning requires a significant amount of training data. We built a library of 2D hyperspectral images of minerals. The library contains reflectance images of 130 samples, of 76 distinct minerals, with more than 3.9 million data points. In order to produce this dataset, various well-characterized mineral samples were scanned, using a SPECIM Short Wave Infrared (SWIR) camera, which captures wavelengths from 900 to 2500 nm. Minerals were selected to represent all the mineral classes and the most common mineral occurrences. For each sample, the following data are provided: (a) At least one hyperspectral image of the sample, consisting of 256 wavelengths between 900 and 2500 nm. The raw data, the high dynamic range (HDR) image, and the masked HDR image are provided for each scan (each of them in HDF5 format). (b) A text file describing the sample, providing supplementary information for the subsequent analysis (c) RGB images (JPEG files) and automated 3D reconstructions (Stanford Triangle PLY files). These data help the user to visualize and understand specific sample characteristics. 2D hyperspectral images were produced for each mineral, which consist of many different spectra with high diversity. The scans feature similar spectra than the ones in other available spectral libraries. An artificial neural network was trained to demonstrate the high quality of the dataset. This spectral library is mainly aimed at training machine learning algorithms, such as neural networks, but can be also used as validation data for other types of classification algorithms. Nature Publishing Group UK 2019-11-11 /pmc/articles/PMC6848079/ /pubmed/31712558 http://dx.doi.org/10.1038/s41597-019-0261-9 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Fasnacht, Laurent
Vogt, Marie-Louise
Renard, Philippe
Brunner, Philip
A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm
title A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm
title_full A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm
title_fullStr A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm
title_full_unstemmed A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm
title_short A 2D hyperspectral library of mineral reflectance, from 900 to 2500 nm
title_sort 2d hyperspectral library of mineral reflectance, from 900 to 2500 nm
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6848079/
https://www.ncbi.nlm.nih.gov/pubmed/31712558
http://dx.doi.org/10.1038/s41597-019-0261-9
work_keys_str_mv AT fasnachtlaurent a2dhyperspectrallibraryofmineralreflectancefrom900to2500nm
AT vogtmarielouise a2dhyperspectrallibraryofmineralreflectancefrom900to2500nm
AT renardphilippe a2dhyperspectrallibraryofmineralreflectancefrom900to2500nm
AT brunnerphilip a2dhyperspectrallibraryofmineralreflectancefrom900to2500nm
AT fasnachtlaurent 2dhyperspectrallibraryofmineralreflectancefrom900to2500nm
AT vogtmarielouise 2dhyperspectrallibraryofmineralreflectancefrom900to2500nm
AT renardphilippe 2dhyperspectrallibraryofmineralreflectancefrom900to2500nm
AT brunnerphilip 2dhyperspectrallibraryofmineralreflectancefrom900to2500nm