Cargando…

Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations

Visualizations of hierarchical data can often be explored interactively. For example, in geographic visualization, there are continents, which can be subdivided into countries, states, counties and cities. Similarly, in models of viruses or bacteria at the highest level are the compartments, and bel...

Descripción completa

Detalles Bibliográficos
Autores principales: Waldin, N., Waldner, M., Le Muzic, M., Gröller, E., Goodsell, D. S., Autin, L., Olson, A. J., Viola, I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6850082/
https://www.ncbi.nlm.nih.gov/pubmed/31736528
http://dx.doi.org/10.1111/cgf.13611
_version_ 1783469342773477376
author Waldin, N.
Waldner, M.
Le Muzic, M.
Gröller, E.
Goodsell, D. S.
Autin, L.
Olson, A. J.
Viola, I.
author_facet Waldin, N.
Waldner, M.
Le Muzic, M.
Gröller, E.
Goodsell, D. S.
Autin, L.
Olson, A. J.
Viola, I.
author_sort Waldin, N.
collection PubMed
description Visualizations of hierarchical data can often be explored interactively. For example, in geographic visualization, there are continents, which can be subdivided into countries, states, counties and cities. Similarly, in models of viruses or bacteria at the highest level are the compartments, and below that are macromolecules, secondary structures (such as α‐helices), amino‐acids, and on the finest level atoms. Distinguishing between items can be assisted through the use of color at all levels. However, currently, there are no hierarchical and adaptive color mapping techniques for very large multi‐scale visualizations that can be explored interactively. We present a novel, multi‐scale, color‐mapping technique for adaptively adjusting the color scheme to the current view and scale. Color is treated as a resource and is smoothly redistributed. The distribution adjusts to the scale of the currently observed detail and maximizes the color range utilization given current viewing requirements. Thus, we ensure that the user is able to distinguish items on any level, even if the color is not constant for a particular feature. The coloring technique is demonstrated for a political map and a mesoscale structural model of HIV. The technique has been tested by users with expertise in structural biology and was overall well received.
format Online
Article
Text
id pubmed-6850082
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-68500822019-11-15 Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations Waldin, N. Waldner, M. Le Muzic, M. Gröller, E. Goodsell, D. S. Autin, L. Olson, A. J. Viola, I. Comput Graph Forum Articles Visualizations of hierarchical data can often be explored interactively. For example, in geographic visualization, there are continents, which can be subdivided into countries, states, counties and cities. Similarly, in models of viruses or bacteria at the highest level are the compartments, and below that are macromolecules, secondary structures (such as α‐helices), amino‐acids, and on the finest level atoms. Distinguishing between items can be assisted through the use of color at all levels. However, currently, there are no hierarchical and adaptive color mapping techniques for very large multi‐scale visualizations that can be explored interactively. We present a novel, multi‐scale, color‐mapping technique for adaptively adjusting the color scheme to the current view and scale. Color is treated as a resource and is smoothly redistributed. The distribution adjusts to the scale of the currently observed detail and maximizes the color range utilization given current viewing requirements. Thus, we ensure that the user is able to distinguish items on any level, even if the color is not constant for a particular feature. The coloring technique is demonstrated for a political map and a mesoscale structural model of HIV. The technique has been tested by users with expertise in structural biology and was overall well received. John Wiley and Sons Inc. 2019-03-26 2019-09 /pmc/articles/PMC6850082/ /pubmed/31736528 http://dx.doi.org/10.1111/cgf.13611 Text en © 2019 The Authors. Computer Graphics Forum published by Eurographics ‐ The European Association for Computer Graphics and John Wiley & Sons Ltd This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Waldin, N.
Waldner, M.
Le Muzic, M.
Gröller, E.
Goodsell, D. S.
Autin, L.
Olson, A. J.
Viola, I.
Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations
title Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations
title_full Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations
title_fullStr Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations
title_full_unstemmed Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations
title_short Cuttlefish: Color Mapping for Dynamic Multi‐Scale Visualizations
title_sort cuttlefish: color mapping for dynamic multi‐scale visualizations
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6850082/
https://www.ncbi.nlm.nih.gov/pubmed/31736528
http://dx.doi.org/10.1111/cgf.13611
work_keys_str_mv AT waldinn cuttlefishcolormappingfordynamicmultiscalevisualizations
AT waldnerm cuttlefishcolormappingfordynamicmultiscalevisualizations
AT lemuzicm cuttlefishcolormappingfordynamicmultiscalevisualizations
AT grollere cuttlefishcolormappingfordynamicmultiscalevisualizations
AT goodsellds cuttlefishcolormappingfordynamicmultiscalevisualizations
AT autinl cuttlefishcolormappingfordynamicmultiscalevisualizations
AT olsonaj cuttlefishcolormappingfordynamicmultiscalevisualizations
AT violai cuttlefishcolormappingfordynamicmultiscalevisualizations