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How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water

Organisms use enzymes to ensure a flow of substrates through biosynthetic pathways. How the earliest form of life established biosynthetic networks and prevented hydrolysis of intermediates without enzymes is unclear. Organocatalysts may have played the role of enzymes. Quantitative analysis of reac...

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Detalles Bibliográficos
Autores principales: Tremmel, Peter, Griesser, Helmut, Steiner, Ulrich E., Richert, Clemens
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852251/
https://www.ncbi.nlm.nih.gov/pubmed/31276284
http://dx.doi.org/10.1002/anie.201905427
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author Tremmel, Peter
Griesser, Helmut
Steiner, Ulrich E.
Richert, Clemens
author_facet Tremmel, Peter
Griesser, Helmut
Steiner, Ulrich E.
Richert, Clemens
author_sort Tremmel, Peter
collection PubMed
description Organisms use enzymes to ensure a flow of substrates through biosynthetic pathways. How the earliest form of life established biosynthetic networks and prevented hydrolysis of intermediates without enzymes is unclear. Organocatalysts may have played the role of enzymes. Quantitative analysis of reactions of adenosine 5’‐monophosphate and glycine that produce peptides, pyrophosphates, and RNA chains reveals that organocapture by heterocycles gives hydrolytically stabilized intermediates with balanced reactivity. We determined rate constants for 20 reactions in aqueous solutions containing a carbodiimide and measured product formation with cyanamide as a condensing agent. Organocapture favors reactions that are kinetically slow but productive, and networks, over single transformations. Heterocycles can increase the metabolic efficiency more than two‐fold, with up to 0.6 useful bonds per fuel molecule spent, boosting the efficiency of life‐like reaction systems in the absence of enzymes.
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spelling pubmed-68522512019-11-22 How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water Tremmel, Peter Griesser, Helmut Steiner, Ulrich E. Richert, Clemens Angew Chem Int Ed Engl Research Articles Organisms use enzymes to ensure a flow of substrates through biosynthetic pathways. How the earliest form of life established biosynthetic networks and prevented hydrolysis of intermediates without enzymes is unclear. Organocatalysts may have played the role of enzymes. Quantitative analysis of reactions of adenosine 5’‐monophosphate and glycine that produce peptides, pyrophosphates, and RNA chains reveals that organocapture by heterocycles gives hydrolytically stabilized intermediates with balanced reactivity. We determined rate constants for 20 reactions in aqueous solutions containing a carbodiimide and measured product formation with cyanamide as a condensing agent. Organocapture favors reactions that are kinetically slow but productive, and networks, over single transformations. Heterocycles can increase the metabolic efficiency more than two‐fold, with up to 0.6 useful bonds per fuel molecule spent, boosting the efficiency of life‐like reaction systems in the absence of enzymes. John Wiley and Sons Inc. 2019-08-09 2019-09-09 /pmc/articles/PMC6852251/ /pubmed/31276284 http://dx.doi.org/10.1002/anie.201905427 Text en © 2019 The Authors. Published by Wiley-VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Tremmel, Peter
Griesser, Helmut
Steiner, Ulrich E.
Richert, Clemens
How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water
title How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water
title_full How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water
title_fullStr How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water
title_full_unstemmed How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water
title_short How Small Heterocycles Make a Reaction Network of Amino Acids and Nucleotides Efficient in Water
title_sort how small heterocycles make a reaction network of amino acids and nucleotides efficient in water
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852251/
https://www.ncbi.nlm.nih.gov/pubmed/31276284
http://dx.doi.org/10.1002/anie.201905427
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