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Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer
PURPOSE: To develop and validate a robust and accurate registration pipeline for automatic contour propagation for online adaptive Intensity‐Modulated Proton Therapy (IMPT) of prostate cancer using elastix software and deep learning. METHODS: A three‐dimensional (3D) Convolutional Neural Network was...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852565/ https://www.ncbi.nlm.nih.gov/pubmed/31111962 http://dx.doi.org/10.1002/mp.13620 |
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author | Elmahdy, Mohamed S. Jagt, Thyrza Zinkstok, Roel Th. Qiao, Yuchuan Shahzad, Rahil Sokooti, Hessam Yousefi, Sahar Incrocci, Luca Marijnen, C.A.M. Hoogeman, Mischa Staring, Marius |
author_facet | Elmahdy, Mohamed S. Jagt, Thyrza Zinkstok, Roel Th. Qiao, Yuchuan Shahzad, Rahil Sokooti, Hessam Yousefi, Sahar Incrocci, Luca Marijnen, C.A.M. Hoogeman, Mischa Staring, Marius |
author_sort | Elmahdy, Mohamed S. |
collection | PubMed |
description | PURPOSE: To develop and validate a robust and accurate registration pipeline for automatic contour propagation for online adaptive Intensity‐Modulated Proton Therapy (IMPT) of prostate cancer using elastix software and deep learning. METHODS: A three‐dimensional (3D) Convolutional Neural Network was trained for automatic bladder segmentation of the computed tomography (CT) scans. The automatic bladder segmentation alongside the computed tomography (CT) scan is jointly optimized to add explicit knowledge about the underlying anatomy to the registration algorithm. We included three datasets from different institutes and CT manufacturers. The first was used for training and testing the ConvNet, where the second and the third were used for evaluation of the proposed pipeline. The system performance was quantified geometrically using the dice similarity coefficient (DSC), the mean surface distance (MSD), and the 95% Hausdorff distance (HD). The propagated contours were validated clinically through generating the associated IMPT plans and compare it with the IMPT plans based on the manual delineations. Propagated contours were considered clinically acceptable if their treatment plans met the dosimetric coverage constraints on the manual contours. RESULTS: The bladder segmentation network achieved a DSC of 88% and 82% on the test datasets. The proposed registration pipeline achieved a MSD of 1.29 ± 0.39, 1.48 ± 1.16, and 1.49 ± 0.44 mm for the prostate, seminal vesicles, and lymph nodes, respectively, on the second dataset and a MSD of 2.31 ± 1.92 and 1.76 ± 1.39 mm for the prostate and seminal vesicles on the third dataset. The automatically propagated contours met the dose coverage constraints in 86%, 91%, and 99% of the cases for the prostate, seminal vesicles, and lymph nodes, respectively. A Conservative Success Rate (CSR) of 80% was obtained, compared to 65% when only using intensity‐based registration. CONCLUSION: The proposed registration pipeline obtained highly promising results for generating treatment plans adapted to the daily anatomy. With 80% of the automatically generated treatment plans directly usable without manual correction, a substantial improvement in system robustness was reached compared to a previous approach. The proposed method therefore facilitates more precise proton therapy of prostate cancer, potentially leading to fewer treatment‐related adverse side effects. |
format | Online Article Text |
id | pubmed-6852565 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-68525652019-11-21 Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer Elmahdy, Mohamed S. Jagt, Thyrza Zinkstok, Roel Th. Qiao, Yuchuan Shahzad, Rahil Sokooti, Hessam Yousefi, Sahar Incrocci, Luca Marijnen, C.A.M. Hoogeman, Mischa Staring, Marius Med Phys THERAPEUTIC INTERVENTIONS PURPOSE: To develop and validate a robust and accurate registration pipeline for automatic contour propagation for online adaptive Intensity‐Modulated Proton Therapy (IMPT) of prostate cancer using elastix software and deep learning. METHODS: A three‐dimensional (3D) Convolutional Neural Network was trained for automatic bladder segmentation of the computed tomography (CT) scans. The automatic bladder segmentation alongside the computed tomography (CT) scan is jointly optimized to add explicit knowledge about the underlying anatomy to the registration algorithm. We included three datasets from different institutes and CT manufacturers. The first was used for training and testing the ConvNet, where the second and the third were used for evaluation of the proposed pipeline. The system performance was quantified geometrically using the dice similarity coefficient (DSC), the mean surface distance (MSD), and the 95% Hausdorff distance (HD). The propagated contours were validated clinically through generating the associated IMPT plans and compare it with the IMPT plans based on the manual delineations. Propagated contours were considered clinically acceptable if their treatment plans met the dosimetric coverage constraints on the manual contours. RESULTS: The bladder segmentation network achieved a DSC of 88% and 82% on the test datasets. The proposed registration pipeline achieved a MSD of 1.29 ± 0.39, 1.48 ± 1.16, and 1.49 ± 0.44 mm for the prostate, seminal vesicles, and lymph nodes, respectively, on the second dataset and a MSD of 2.31 ± 1.92 and 1.76 ± 1.39 mm for the prostate and seminal vesicles on the third dataset. The automatically propagated contours met the dose coverage constraints in 86%, 91%, and 99% of the cases for the prostate, seminal vesicles, and lymph nodes, respectively. A Conservative Success Rate (CSR) of 80% was obtained, compared to 65% when only using intensity‐based registration. CONCLUSION: The proposed registration pipeline obtained highly promising results for generating treatment plans adapted to the daily anatomy. With 80% of the automatically generated treatment plans directly usable without manual correction, a substantial improvement in system robustness was reached compared to a previous approach. The proposed method therefore facilitates more precise proton therapy of prostate cancer, potentially leading to fewer treatment‐related adverse side effects. John Wiley and Sons Inc. 2019-07-12 2019-08 /pmc/articles/PMC6852565/ /pubmed/31111962 http://dx.doi.org/10.1002/mp.13620 Text en © 2019 The Authors. Medical Physics published by Wiley Periodicals, Inc. on behalf of American Association of Physicists in Medicine. This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes. |
spellingShingle | THERAPEUTIC INTERVENTIONS Elmahdy, Mohamed S. Jagt, Thyrza Zinkstok, Roel Th. Qiao, Yuchuan Shahzad, Rahil Sokooti, Hessam Yousefi, Sahar Incrocci, Luca Marijnen, C.A.M. Hoogeman, Mischa Staring, Marius Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer |
title | Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer |
title_full | Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer |
title_fullStr | Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer |
title_full_unstemmed | Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer |
title_short | Robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer |
title_sort | robust contour propagation using deep learning and image registration for online adaptive proton therapy of prostate cancer |
topic | THERAPEUTIC INTERVENTIONS |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852565/ https://www.ncbi.nlm.nih.gov/pubmed/31111962 http://dx.doi.org/10.1002/mp.13620 |
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