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Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep

The aim of this study was to estimate the effect of variation in the fatty acid binding protein 4 gene (FABP4) on milk production traits in Greek Sfakia sheep. Polymerase chain reaction – single-stranded conformational polymorphism (PCR-SSCP) analysis was used to genotype a total of 374 Sfakia ewes...

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Autores principales: Ibrahim, Adel H. M., Tzanidakis, Nikolaos, Sotiraki, Smaragda, Zhou, Huitong, Hickford, Jonathan G. H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Copernicus GmbH 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852875/
https://www.ncbi.nlm.nih.gov/pubmed/31807652
http://dx.doi.org/10.5194/aab-62-413-2019
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author Ibrahim, Adel H. M.
Tzanidakis, Nikolaos
Sotiraki, Smaragda
Zhou, Huitong
Hickford, Jonathan G. H.
author_facet Ibrahim, Adel H. M.
Tzanidakis, Nikolaos
Sotiraki, Smaragda
Zhou, Huitong
Hickford, Jonathan G. H.
author_sort Ibrahim, Adel H. M.
collection PubMed
description The aim of this study was to estimate the effect of variation in the fatty acid binding protein 4 gene (FABP4) on milk production traits in Greek Sfakia sheep. Polymerase chain reaction – single-stranded conformational polymorphism (PCR-SSCP) analysis was used to genotype a total of 374 Sfakia ewes for two regions of FABP4 located around exon 2–intron 2 (Region 1) and exon 3–intron 3 (Region 2). Each month, for a period of 6 months, milk samples were collected from the ewes to measure total milk yield, fat content, protein content, lactose content, non-fat solid content, pH, and somatic cell count (SCC). A general linear model was used to test the association between the variation observed in FABP4 and milk production traits. Four gene variants (A1–A4) were found in Region 1 and two variants (C1–C2) were found in Region 2. In the first region, the FABP4 genotype significantly affected ([Formula: see text]) non-fat solid levels, fat content, and SCC. The presence of the A2 variant was significantly associated ([Formula: see text]) with decreased SCC, while the presence of A4 was significantly associated with decreased milk yield ([Formula: see text]), increased non-fat solid content ([Formula: see text]), decreased fat content ([Formula: see text]), increased lactose content ([Formula: see text]), and increased pH ([Formula: see text]). In the second region, FABP4 genotype had an effect ([Formula: see text]) on protein content and the presence of the C2 variant was associated ([Formula: see text]) with increased protein content, decreased SCC, and lower pH. The results suggest an association between variation in ovine FABP4 and milk production traits in Greek Sfakia sheep. Nevertheless, further analyses in independent sheep populations of increased size will strengthen these findings.
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spelling pubmed-68528752019-11-26 Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep Ibrahim, Adel H. M. Tzanidakis, Nikolaos Sotiraki, Smaragda Zhou, Huitong Hickford, Jonathan G. H. Arch Anim Breed Original Study The aim of this study was to estimate the effect of variation in the fatty acid binding protein 4 gene (FABP4) on milk production traits in Greek Sfakia sheep. Polymerase chain reaction – single-stranded conformational polymorphism (PCR-SSCP) analysis was used to genotype a total of 374 Sfakia ewes for two regions of FABP4 located around exon 2–intron 2 (Region 1) and exon 3–intron 3 (Region 2). Each month, for a period of 6 months, milk samples were collected from the ewes to measure total milk yield, fat content, protein content, lactose content, non-fat solid content, pH, and somatic cell count (SCC). A general linear model was used to test the association between the variation observed in FABP4 and milk production traits. Four gene variants (A1–A4) were found in Region 1 and two variants (C1–C2) were found in Region 2. In the first region, the FABP4 genotype significantly affected ([Formula: see text]) non-fat solid levels, fat content, and SCC. The presence of the A2 variant was significantly associated ([Formula: see text]) with decreased SCC, while the presence of A4 was significantly associated with decreased milk yield ([Formula: see text]), increased non-fat solid content ([Formula: see text]), decreased fat content ([Formula: see text]), increased lactose content ([Formula: see text]), and increased pH ([Formula: see text]). In the second region, FABP4 genotype had an effect ([Formula: see text]) on protein content and the presence of the C2 variant was associated ([Formula: see text]) with increased protein content, decreased SCC, and lower pH. The results suggest an association between variation in ovine FABP4 and milk production traits in Greek Sfakia sheep. Nevertheless, further analyses in independent sheep populations of increased size will strengthen these findings. Copernicus GmbH 2019-07-15 /pmc/articles/PMC6852875/ /pubmed/31807652 http://dx.doi.org/10.5194/aab-62-413-2019 Text en Copyright: © 2019 Adel H. M. Ibrahim et al. This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/
spellingShingle Original Study
Ibrahim, Adel H. M.
Tzanidakis, Nikolaos
Sotiraki, Smaragda
Zhou, Huitong
Hickford, Jonathan G. H.
Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep
title Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep
title_full Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep
title_fullStr Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep
title_full_unstemmed Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep
title_short Identification of the association between FABP4 gene polymorphisms and milk production traits in Sfakia sheep
title_sort identification of the association between fabp4 gene polymorphisms and milk production traits in sfakia sheep
topic Original Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6852875/
https://www.ncbi.nlm.nih.gov/pubmed/31807652
http://dx.doi.org/10.5194/aab-62-413-2019
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