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Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
Copy number variations (CNVs) are gains and losses of genomic sequence of more than 50 bp between two individuals of a species. Also, CNV is considered to be one of the main elements affecting the phenotypic diversity and evolutionary adaptation of animals. ORMDL sphingolipid biosynthesis regulator...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Copernicus GmbH
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6853131/ https://www.ncbi.nlm.nih.gov/pubmed/31807669 http://dx.doi.org/10.5194/aab-62-571-2019 |
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author | Wang, Xiaogang Cao, Xiukai Wen, Yifan Ma, Yilei Elnour, Ibrahim Elsaeid Huang, Yongzhen Lan, Xianyong Chaogetu, Buren Hu, Linyong Chen, Hong |
author_facet | Wang, Xiaogang Cao, Xiukai Wen, Yifan Ma, Yilei Elnour, Ibrahim Elsaeid Huang, Yongzhen Lan, Xianyong Chaogetu, Buren Hu, Linyong Chen, Hong |
author_sort | Wang, Xiaogang |
collection | PubMed |
description | Copy number variations (CNVs) are gains and losses of genomic sequence of more than 50 bp between two individuals of a species. Also, CNV is considered to be one of the main elements affecting the phenotypic diversity and evolutionary adaptation of animals. ORMDL sphingolipid biosynthesis regulator 1 (ORMDL1) is a protein-coding gene associated with diseases and development. In our study, the polymorphism of ORMDL1 gene copy numbers in four Chinese sheep breeds (abbreviated CK, HU, STH, and LTH) was detected. In addition, we analyzed the transcriptional expression level of ORMDL1 gene in different tissues of sheep and examined the association of ORMDL1 CNV with growth traits. The statistical analysis revealed that ORMDL1 CNV was remarkably correlated with body height, heart girth, and circumference of cannon bone in HU sheep ([Formula: see text]), and there are significant effects on body weight, body height, body length, chest depth, and height of hip cross in STH sheep ([Formula: see text]). In conclusion, our results provide a basis for the relationship between CNV of ORMDL1 gene and sheep growth traits, suggesting that ORMDL1 CNV may be considered a promising marker for the molecular breeding of Chinese sheep. |
format | Online Article Text |
id | pubmed-6853131 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Copernicus GmbH |
record_format | MEDLINE/PubMed |
spelling | pubmed-68531312019-11-26 Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds Wang, Xiaogang Cao, Xiukai Wen, Yifan Ma, Yilei Elnour, Ibrahim Elsaeid Huang, Yongzhen Lan, Xianyong Chaogetu, Buren Hu, Linyong Chen, Hong Arch Anim Breed Original Study Copy number variations (CNVs) are gains and losses of genomic sequence of more than 50 bp between two individuals of a species. Also, CNV is considered to be one of the main elements affecting the phenotypic diversity and evolutionary adaptation of animals. ORMDL sphingolipid biosynthesis regulator 1 (ORMDL1) is a protein-coding gene associated with diseases and development. In our study, the polymorphism of ORMDL1 gene copy numbers in four Chinese sheep breeds (abbreviated CK, HU, STH, and LTH) was detected. In addition, we analyzed the transcriptional expression level of ORMDL1 gene in different tissues of sheep and examined the association of ORMDL1 CNV with growth traits. The statistical analysis revealed that ORMDL1 CNV was remarkably correlated with body height, heart girth, and circumference of cannon bone in HU sheep ([Formula: see text]), and there are significant effects on body weight, body height, body length, chest depth, and height of hip cross in STH sheep ([Formula: see text]). In conclusion, our results provide a basis for the relationship between CNV of ORMDL1 gene and sheep growth traits, suggesting that ORMDL1 CNV may be considered a promising marker for the molecular breeding of Chinese sheep. Copernicus GmbH 2019-10-21 /pmc/articles/PMC6853131/ /pubmed/31807669 http://dx.doi.org/10.5194/aab-62-571-2019 Text en Copyright: © 2019 Xiaogang Wang et al. This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Original Study Wang, Xiaogang Cao, Xiukai Wen, Yifan Ma, Yilei Elnour, Ibrahim Elsaeid Huang, Yongzhen Lan, Xianyong Chaogetu, Buren Hu, Linyong Chen, Hong Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds |
title | Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds |
title_full | Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds |
title_fullStr | Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds |
title_full_unstemmed | Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds |
title_short | Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds |
title_sort | associations of ormdl1 gene copy number variations with growth traits in four chinese sheep breeds |
topic | Original Study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6853131/ https://www.ncbi.nlm.nih.gov/pubmed/31807669 http://dx.doi.org/10.5194/aab-62-571-2019 |
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