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Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds

Copy number variations (CNVs) are gains and losses of genomic sequence of more than 50 bp between two individuals of a species. Also, CNV is considered to be one of the main elements affecting the phenotypic diversity and evolutionary adaptation of animals. ORMDL sphingolipid biosynthesis regulator...

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Autores principales: Wang, Xiaogang, Cao, Xiukai, Wen, Yifan, Ma, Yilei, Elnour, Ibrahim Elsaeid, Huang, Yongzhen, Lan, Xianyong, Chaogetu, Buren, Hu, Linyong, Chen, Hong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Copernicus GmbH 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6853131/
https://www.ncbi.nlm.nih.gov/pubmed/31807669
http://dx.doi.org/10.5194/aab-62-571-2019
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author Wang, Xiaogang
Cao, Xiukai
Wen, Yifan
Ma, Yilei
Elnour, Ibrahim Elsaeid
Huang, Yongzhen
Lan, Xianyong
Chaogetu, Buren
Hu, Linyong
Chen, Hong
author_facet Wang, Xiaogang
Cao, Xiukai
Wen, Yifan
Ma, Yilei
Elnour, Ibrahim Elsaeid
Huang, Yongzhen
Lan, Xianyong
Chaogetu, Buren
Hu, Linyong
Chen, Hong
author_sort Wang, Xiaogang
collection PubMed
description Copy number variations (CNVs) are gains and losses of genomic sequence of more than 50 bp between two individuals of a species. Also, CNV is considered to be one of the main elements affecting the phenotypic diversity and evolutionary adaptation of animals. ORMDL sphingolipid biosynthesis regulator 1 (ORMDL1) is a protein-coding gene associated with diseases and development. In our study, the polymorphism of ORMDL1 gene copy numbers in four Chinese sheep breeds (abbreviated CK, HU, STH, and LTH) was detected. In addition, we analyzed the transcriptional expression level of ORMDL1 gene in different tissues of sheep and examined the association of ORMDL1 CNV with growth traits. The statistical analysis revealed that ORMDL1 CNV was remarkably correlated with body height, heart girth, and circumference of cannon bone in HU sheep ([Formula: see text]), and there are significant effects on body weight, body height, body length, chest depth, and height of hip cross in STH sheep ([Formula: see text]). In conclusion, our results provide a basis for the relationship between CNV of ORMDL1 gene and sheep growth traits, suggesting that ORMDL1 CNV may be considered a promising marker for the molecular breeding of Chinese sheep.
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spelling pubmed-68531312019-11-26 Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds Wang, Xiaogang Cao, Xiukai Wen, Yifan Ma, Yilei Elnour, Ibrahim Elsaeid Huang, Yongzhen Lan, Xianyong Chaogetu, Buren Hu, Linyong Chen, Hong Arch Anim Breed Original Study Copy number variations (CNVs) are gains and losses of genomic sequence of more than 50 bp between two individuals of a species. Also, CNV is considered to be one of the main elements affecting the phenotypic diversity and evolutionary adaptation of animals. ORMDL sphingolipid biosynthesis regulator 1 (ORMDL1) is a protein-coding gene associated with diseases and development. In our study, the polymorphism of ORMDL1 gene copy numbers in four Chinese sheep breeds (abbreviated CK, HU, STH, and LTH) was detected. In addition, we analyzed the transcriptional expression level of ORMDL1 gene in different tissues of sheep and examined the association of ORMDL1 CNV with growth traits. The statistical analysis revealed that ORMDL1 CNV was remarkably correlated with body height, heart girth, and circumference of cannon bone in HU sheep ([Formula: see text]), and there are significant effects on body weight, body height, body length, chest depth, and height of hip cross in STH sheep ([Formula: see text]). In conclusion, our results provide a basis for the relationship between CNV of ORMDL1 gene and sheep growth traits, suggesting that ORMDL1 CNV may be considered a promising marker for the molecular breeding of Chinese sheep. Copernicus GmbH 2019-10-21 /pmc/articles/PMC6853131/ /pubmed/31807669 http://dx.doi.org/10.5194/aab-62-571-2019 Text en Copyright: © 2019 Xiaogang Wang et al. This work is licensed under the Creative Commons Attribution 4.0 International License. To view a copy of this licence, visit https://creativecommons.org/licenses/by/4.0/
spellingShingle Original Study
Wang, Xiaogang
Cao, Xiukai
Wen, Yifan
Ma, Yilei
Elnour, Ibrahim Elsaeid
Huang, Yongzhen
Lan, Xianyong
Chaogetu, Buren
Hu, Linyong
Chen, Hong
Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
title Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
title_full Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
title_fullStr Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
title_full_unstemmed Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
title_short Associations of ORMDL1 gene copy number variations with growth traits in four Chinese sheep breeds
title_sort associations of ormdl1 gene copy number variations with growth traits in four chinese sheep breeds
topic Original Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6853131/
https://www.ncbi.nlm.nih.gov/pubmed/31807669
http://dx.doi.org/10.5194/aab-62-571-2019
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