snakePipes: facilitating flexible, scalable and integrative epigenomic analysis

SUMMARY: Due to the rapidly increasing scale and diversity of epigenomic data, modular and scalable analysis workflows are of wide interest. Here we present snakePipes, a workflow package for processing and downstream analysis of data from common epigenomic assays: ChIP-seq, RNA-seq, Bisulfite-seq,...

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Detalles Bibliográficos
Autores principales: Bhardwaj, Vivek, Heyne, Steffen, Sikora, Katarzyna, Rabbani, Leily, Rauer, Michael, Kilpert, Fabian, Richter, Andreas S, Ryan, Devon P, Manke, Thomas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6853707/
https://www.ncbi.nlm.nih.gov/pubmed/31134269
http://dx.doi.org/10.1093/bioinformatics/btz436

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6853707/
https://www.ncbi.nlm.nih.gov/pubmed/31134269
http://dx.doi.org/10.1093/bioinformatics/btz436

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