Cargando…

WDSPdb: an updated resource for WD40 proteins

SUMMARY: The WD40-repeat proteins are a large family of scaffold molecules that assemble complexes in various cellular processes. Obtaining their structures is the key to understanding their interaction details. We present WDSPdb 2.0, a significantly updated resource providing accurately predicted s...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ma, Jing, An, Ke, Zhou, Jing-Bo, Wu, Nuo-Si, Wang, Yang, Ye, Zhi-Qiang, Wu, Yun-Dong
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2019
Materias:	Applications Notes
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6853709/ https://www.ncbi.nlm.nih.gov/pubmed/31161214 http://dx.doi.org/10.1093/bioinformatics/btz460

Ejemplares similares

WDSPdb: a database for WD40-repeat proteins
por: Wang, Yang, et al.
Publicado: (2014)

Genome-wide Analysis of WD40 Protein Family in Human
por: Zou, Xu-Dong, et al.
Publicado: (2016)

Prokaryotic and Highly-Repetitive WD40 Proteins: A Systematic Study
por: Hu, Xue-Jia, et al.
Publicado: (2017)

PPI network analyses of human WD40 protein family systematically reveal their tendency to assemble complexes and facilitate the complex predictions
por: Zou, Xu-Dong, et al.
Publicado: (2018)

Genome-wide analysis of WD40 protein family and functional characterization of BvWD40-82 in sugar beet
por: Wu, Zhirui, et al.
Publicado: (2023)

ZooPathWeb: a comprehensive web resource for zoonotic pathogens
por: Hu, Rui-Si, et al.
Publicado: (2023)

MEGADOCK 4.0: an ultra–high-performance protein–protein docking software for heterogeneous supercomputers
por: Ohue, Masahito, et al.
Publicado: (2014)

A Method for WD40 Repeat Detection and Secondary Structure Prediction
por: Wang, Yang, et al.
Publicado: (2013)

HSPIR: a manually annotated heat shock protein information resource
por: R., Ratheesh Kumar, et al.
Publicado: (2012)

Genetic Simulation Resources: a website for the registration and discovery of genetic data simulators
por: Peng, Bo, et al.
Publicado: (2013)

STRIKE-GOLDD 4.0: user-friendly, efficient analysis of structural identifiability and observability
por: Díaz-Seoane, Sandra, et al.
Publicado: (2022)

PUmPER: phylogenies updated perpetually
por: Izquierdo-Carrasco, Fernando, et al.
Publicado: (2014)

Cytoscape.js 2023 update: a graph theory library for visualization and analysis
por: Franz, Max, et al.
Publicado: (2023)

Biophysical and structural characterization of the thermostable WD40 domain of a prokaryotic protein, Thermomonospora curvata PkwA
por: Shen, Chen, et al.
Publicado: (2018)

Updates to the RMAP short-read mapping software
por: Smith, Andrew D., et al.
Publicado: (2009)

PGAT: a multistrain analysis resource for microbial genomes
por: Brittnacher, M. J., et al.
Publicado: (2011)

The uniqueome: a mappability resource for short-tag sequencing
por: Koehler, Ryan, et al.
Publicado: (2011)

GALT Protein Database, a Bioinformatics Resource for the Management and Analysis of Structural Features of a Galactosemia-related Protein and Its Mutants
por: d’Acierno, Antonio, et al.
Publicado: (2009)

PPDMs—a resource for mapping small molecule bioactivities from ChEMBL to Pfam-A protein domains
por: Kruger, Felix A., et al.
Publicado: (2015)

FuncBase : a resource for quantitative gene function annotation
por: Beaver, John E., et al.
Publicado: (2010)

RBAtools: a programming interface for Resource Balance Analysis models
por: Bodeit, Oliver, et al.
Publicado: (2023)

Selection of oligonucleotides for whole-genome microarrays with semi-automatic update
por: Golfier, G., et al.
Publicado: (2009)

SurvCurv database and online survival analysis platform update
por: Ziehm, Matthias, et al.
Publicado: (2015)

RNA-Rocket: an RNA-Seq analysis resource for infectious disease research
por: Warren, Andrew S., et al.
Publicado: (2015)

BioCIDER: a Contextualisation InDEx for biological Resources discovery
por: Horro, Carlos, et al.
Publicado: (2017)

ensembldb: an R package to create and use Ensembl-based annotation resources
por: Rainer, Johannes, et al.
Publicado: (2019)

ChAMP: updated methylation analysis pipeline for Illumina BeadChips
por: Tian, Yuan, et al.
Publicado: (2017)

Updated site concordance factors minimize effects of homoplasy and taxon sampling
por: Mo, Yu K, et al.
Publicado: (2022)

Crystal structure of the WD40 domain dimer of LRRK2
por: Zhang, Pengfei, et al.
Publicado: (2019)

Allergen Atlas: a comprehensive knowledge center and analysis resource for allergen information
por: Tong, Joo Chuan, et al.
Publicado: (2009)

Towards the construction of an interactome for Human WD40 protein family
por: Santosh Kumar, Hulikal Shivashankara, et al.
Publicado: (2016)

MaveQuest: a web resource for planning experimental tests of human variant effects
por: Kuang, Da, et al.
Publicado: (2020)

rePROBE: Workflow for Revised Probe Assignment and Updated Probe-set Annotation in Microarrays
por: Hadlich, Frieder, et al.
Publicado: (2021)

The RNASeq-er API—a gateway to systematically updated analysis of public RNA-seq data
por: Petryszak, Robert, et al.
Publicado: (2017)

CPSS 2.0: a computational platform update for the analysis of small RNA sequencing data
por: Wan, Changlin, et al.
Publicado: (2017)

BAGET 2.0: an updated web tool for the effortless retrieval of prokaryotic gene context and sequence
por: Hepp, Benjamin, et al.
Publicado: (2021)

Identifying the Hotspots on the Top Faces of WD40-Repeat Proteins from Their Primary Sequences by β-Bulges and DHSW Tetrads
por: Wu, Xian-Hui, et al.
Publicado: (2012)

Pathway Processor 2.0: a web resource for pathway-based analysis of high-throughput data
por: Beltrame, Luca, et al.
Publicado: (2013)

The development and electronic delivery of case-based learning using a fast healthcare interoperability resource system
por: Braunstein, Mark L, et al.
Publicado: (2019)

eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic data
por: Breeze, Charles E, et al.
Publicado: (2019)

Cannot write session to /tmp/vufind_sessions/sess_gdsiofamp6dukv66ptser0earo