Cargando…

Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery

A way to defeat antimicrobial resistance (AMR) crisis is to supply novel drugs to the pharmaceutical industry. This effort leads to a global call for seeking the beneficial microbes from underexplored habitats. To support this call, we isolated Streptomyces sp. TM32 from the rhizosphere soil of a me...

Descripción completa

Detalles Bibliográficos
Autores principales: Nakaew, Nareeluk, Lumyong, Saisamorn, Sloan, William T., Sungthong, Rungroch
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854843/
https://www.ncbi.nlm.nih.gov/pubmed/30941917
http://dx.doi.org/10.1002/mbo3.842
_version_ 1783470294345711616
author Nakaew, Nareeluk
Lumyong, Saisamorn
Sloan, William T.
Sungthong, Rungroch
author_facet Nakaew, Nareeluk
Lumyong, Saisamorn
Sloan, William T.
Sungthong, Rungroch
author_sort Nakaew, Nareeluk
collection PubMed
description A way to defeat antimicrobial resistance (AMR) crisis is to supply novel drugs to the pharmaceutical industry. This effort leads to a global call for seeking the beneficial microbes from underexplored habitats. To support this call, we isolated Streptomyces sp. TM32 from the rhizosphere soil of a medicinal plant, turmeric (Curcuma longa L.). TM32 exhibited strong antimicrobial activities against both human and plant pathogens, including an AMR pathogen, Staphylococcus haemolyticus MR‐CoNS. Surprisingly, such antimicrobial results of TM32's autoclaved crude extract remained the same. Based on the genome data analysis, TM32 belongs to the same genomic species with Streptomyces sioyaensis DSM 40032(T), supported by the relatively high‐average nucleotide identity values (ANIb: 96.80% and OrthoANIu: 97.14%) and in silico DNA–DNA relatedness value of 75.40%. Importantly, the gene annotation analyses revealed that TM32's genome contains various genes encoding the biosynthesis of either known or unknown antibiotics and some metabolites involved in plant growth‐promoting traits. However, bioactivities and genome data comparison of TM32 and DSM 40032(T) showed a set of apparent differences, for example, antimicrobial potentials, genome size, number, and occurrence of coding DNA sequences in the chromosomes. These findings suggest that TM32 is a new strain of S. sioyaensis and serves as an emerging source for further discovery of valuable and novel bioactive compounds.
format Online
Article
Text
id pubmed-6854843
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher John Wiley and Sons Inc.
record_format MEDLINE/PubMed
spelling pubmed-68548432019-12-16 Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery Nakaew, Nareeluk Lumyong, Saisamorn Sloan, William T. Sungthong, Rungroch Microbiologyopen Original Articles A way to defeat antimicrobial resistance (AMR) crisis is to supply novel drugs to the pharmaceutical industry. This effort leads to a global call for seeking the beneficial microbes from underexplored habitats. To support this call, we isolated Streptomyces sp. TM32 from the rhizosphere soil of a medicinal plant, turmeric (Curcuma longa L.). TM32 exhibited strong antimicrobial activities against both human and plant pathogens, including an AMR pathogen, Staphylococcus haemolyticus MR‐CoNS. Surprisingly, such antimicrobial results of TM32's autoclaved crude extract remained the same. Based on the genome data analysis, TM32 belongs to the same genomic species with Streptomyces sioyaensis DSM 40032(T), supported by the relatively high‐average nucleotide identity values (ANIb: 96.80% and OrthoANIu: 97.14%) and in silico DNA–DNA relatedness value of 75.40%. Importantly, the gene annotation analyses revealed that TM32's genome contains various genes encoding the biosynthesis of either known or unknown antibiotics and some metabolites involved in plant growth‐promoting traits. However, bioactivities and genome data comparison of TM32 and DSM 40032(T) showed a set of apparent differences, for example, antimicrobial potentials, genome size, number, and occurrence of coding DNA sequences in the chromosomes. These findings suggest that TM32 is a new strain of S. sioyaensis and serves as an emerging source for further discovery of valuable and novel bioactive compounds. John Wiley and Sons Inc. 2019-04-02 /pmc/articles/PMC6854843/ /pubmed/30941917 http://dx.doi.org/10.1002/mbo3.842 Text en © 2019 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Nakaew, Nareeluk
Lumyong, Saisamorn
Sloan, William T.
Sungthong, Rungroch
Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery
title Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery
title_full Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery
title_fullStr Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery
title_full_unstemmed Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery
title_short Bioactivities and genome insights of a thermotolerant antibiotics‐producing Streptomyces sp. TM32 reveal its potentials for novel drug discovery
title_sort bioactivities and genome insights of a thermotolerant antibiotics‐producing streptomyces sp. tm32 reveal its potentials for novel drug discovery
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854843/
https://www.ncbi.nlm.nih.gov/pubmed/30941917
http://dx.doi.org/10.1002/mbo3.842
work_keys_str_mv AT nakaewnareeluk bioactivitiesandgenomeinsightsofathermotolerantantibioticsproducingstreptomycessptm32revealitspotentialsfornoveldrugdiscovery
AT lumyongsaisamorn bioactivitiesandgenomeinsightsofathermotolerantantibioticsproducingstreptomycessptm32revealitspotentialsfornoveldrugdiscovery
AT sloanwilliamt bioactivitiesandgenomeinsightsofathermotolerantantibioticsproducingstreptomycessptm32revealitspotentialsfornoveldrugdiscovery
AT sungthongrungroch bioactivitiesandgenomeinsightsofathermotolerantantibioticsproducingstreptomycessptm32revealitspotentialsfornoveldrugdiscovery