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Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient

BACKGROUND: Novel biomarkers provide clinicians more critical information on tumor genetic features and patients’ prognosis. Here, we aimed to establish prognosis-predicting signatures for endometrial carcinoma (EC) patients based on the miRNA information. MATERIAL/METHODS: The Cancer Genome Atlas (...

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Autores principales: Tang, Jia, Ma, Wei, Luo, Liangping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Scientific Literature, Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854891/
https://www.ncbi.nlm.nih.gov/pubmed/31678981
http://dx.doi.org/10.12659/MSM.917813
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author Tang, Jia
Ma, Wei
Luo, Liangping
author_facet Tang, Jia
Ma, Wei
Luo, Liangping
author_sort Tang, Jia
collection PubMed
description BACKGROUND: Novel biomarkers provide clinicians more critical information on tumor genetic features and patients’ prognosis. Here, we aimed to establish prognosis-predicting signatures for endometrial carcinoma (EC) patients based on the miRNA information. MATERIAL/METHODS: The Cancer Genome Atlas (TCGA) website was available for dataset extraction. Prognosis-associated miRNAs were generated by univariate Cox regression test. Online websites were used to predict the targeted genes of these enrolled miRNAs. The miRNA-mRNA network was described by Cytoscape software, while the relevant signaling pathways of these targeted genes were enriched by Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses. RESULTS: The miRNA-based overall survival (OS) and recurrence-free survival (RFS) predicting signatures were constructed by LASSO Cox regression analyses, respectively, by which, the endometrial carcinoma patients were separated into high- and low-risk groups in both the discovery and validation sets. Univariate Cox regression analyses suggested that these high-risk patients had elevated death and recurrence risk compared to low-risk patients. In addition, multivariate Cox regression analysis confirmed that our signatures were independent prognosticate factors with or without clinicopathological features for endometrial carcinoma patients. Moreover, the miRNA-mRNA network was displayed by Cytoscape software, and the pathway enrichment analyses found that the targeted genes of these enrolled miRNAs were enriched in tumor progression and drug resistance-related pathways. CONCLUSIONS: The OS and RFS predicting classifiers serve as independent prognosis-associated determiners for EC patients.
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spelling pubmed-68548912019-11-19 Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient Tang, Jia Ma, Wei Luo, Liangping Med Sci Monit Lab/In Vitro Research BACKGROUND: Novel biomarkers provide clinicians more critical information on tumor genetic features and patients’ prognosis. Here, we aimed to establish prognosis-predicting signatures for endometrial carcinoma (EC) patients based on the miRNA information. MATERIAL/METHODS: The Cancer Genome Atlas (TCGA) website was available for dataset extraction. Prognosis-associated miRNAs were generated by univariate Cox regression test. Online websites were used to predict the targeted genes of these enrolled miRNAs. The miRNA-mRNA network was described by Cytoscape software, while the relevant signaling pathways of these targeted genes were enriched by Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses. RESULTS: The miRNA-based overall survival (OS) and recurrence-free survival (RFS) predicting signatures were constructed by LASSO Cox regression analyses, respectively, by which, the endometrial carcinoma patients were separated into high- and low-risk groups in both the discovery and validation sets. Univariate Cox regression analyses suggested that these high-risk patients had elevated death and recurrence risk compared to low-risk patients. In addition, multivariate Cox regression analysis confirmed that our signatures were independent prognosticate factors with or without clinicopathological features for endometrial carcinoma patients. Moreover, the miRNA-mRNA network was displayed by Cytoscape software, and the pathway enrichment analyses found that the targeted genes of these enrolled miRNAs were enriched in tumor progression and drug resistance-related pathways. CONCLUSIONS: The OS and RFS predicting classifiers serve as independent prognosis-associated determiners for EC patients. International Scientific Literature, Inc. 2019-11-03 /pmc/articles/PMC6854891/ /pubmed/31678981 http://dx.doi.org/10.12659/MSM.917813 Text en © Med Sci Monit, 2019 This work is licensed under Creative Common Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0 (https://creativecommons.org/licenses/by-nc-nd/4.0/) )
spellingShingle Lab/In Vitro Research
Tang, Jia
Ma, Wei
Luo, Liangping
Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient
title Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient
title_full Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient
title_fullStr Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient
title_full_unstemmed Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient
title_short Establishment of the Prognosis Predicting Signature for Endometrial Cancer Patient
title_sort establishment of the prognosis predicting signature for endometrial cancer patient
topic Lab/In Vitro Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6854891/
https://www.ncbi.nlm.nih.gov/pubmed/31678981
http://dx.doi.org/10.12659/MSM.917813
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