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Forget binning and get SMART: Getting more out of the time-course of response data
Many experiments aim to investigate the time-course of cognitive processes while measuring a single response per trial. A common first step in the analysis of such data is to divide them into a limited number of bins. As we demonstrate here, the way one chooses these bins can considerably influence...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856044/ https://www.ncbi.nlm.nih.gov/pubmed/31214973 http://dx.doi.org/10.3758/s13414-019-01788-3 |
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author | van Leeuwen, Jonathan Smeets, Jeroen B. J. Belopolsky, Artem V. |
author_facet | van Leeuwen, Jonathan Smeets, Jeroen B. J. Belopolsky, Artem V. |
author_sort | van Leeuwen, Jonathan |
collection | PubMed |
description | Many experiments aim to investigate the time-course of cognitive processes while measuring a single response per trial. A common first step in the analysis of such data is to divide them into a limited number of bins. As we demonstrate here, the way one chooses these bins can considerably influence the resulting time-course. As a solution to this problem, we here present the smoothing method for analysis of response time-course (SMART)—a complete package for reconstructing the time-course from one-sample-per-trial data and performing statistical analysis. After smoothing the data, the SMART weights the data based on the effective number of data points per participant. A cluster-based permutation test then determines at which moments the responses differ from a baseline or between two conditions. We show here that, in contrast to contemporary binning methods, the chosen temporal resolution has a negligible effect on the SMART reconstructed time-course. To facilitate its use, the SMART method, accompanied by a tutorial, is available as an open-source package. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.3758/s13414-019-01788-3) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6856044 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-68560442019-12-03 Forget binning and get SMART: Getting more out of the time-course of response data van Leeuwen, Jonathan Smeets, Jeroen B. J. Belopolsky, Artem V. Atten Percept Psychophys Article Many experiments aim to investigate the time-course of cognitive processes while measuring a single response per trial. A common first step in the analysis of such data is to divide them into a limited number of bins. As we demonstrate here, the way one chooses these bins can considerably influence the resulting time-course. As a solution to this problem, we here present the smoothing method for analysis of response time-course (SMART)—a complete package for reconstructing the time-course from one-sample-per-trial data and performing statistical analysis. After smoothing the data, the SMART weights the data based on the effective number of data points per participant. A cluster-based permutation test then determines at which moments the responses differ from a baseline or between two conditions. We show here that, in contrast to contemporary binning methods, the chosen temporal resolution has a negligible effect on the SMART reconstructed time-course. To facilitate its use, the SMART method, accompanied by a tutorial, is available as an open-source package. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.3758/s13414-019-01788-3) contains supplementary material, which is available to authorized users. Springer US 2019-06-18 2019 /pmc/articles/PMC6856044/ /pubmed/31214973 http://dx.doi.org/10.3758/s13414-019-01788-3 Text en © The Author(s) 2019 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article van Leeuwen, Jonathan Smeets, Jeroen B. J. Belopolsky, Artem V. Forget binning and get SMART: Getting more out of the time-course of response data |
title | Forget binning and get SMART: Getting more out of the time-course of response data |
title_full | Forget binning and get SMART: Getting more out of the time-course of response data |
title_fullStr | Forget binning and get SMART: Getting more out of the time-course of response data |
title_full_unstemmed | Forget binning and get SMART: Getting more out of the time-course of response data |
title_short | Forget binning and get SMART: Getting more out of the time-course of response data |
title_sort | forget binning and get smart: getting more out of the time-course of response data |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856044/ https://www.ncbi.nlm.nih.gov/pubmed/31214973 http://dx.doi.org/10.3758/s13414-019-01788-3 |
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