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An evaluation of the SureID 23comp Human Identification Kit for kinship testing

Short tandem repeat (STR) profiling has been routinely used in kinship testing since the introduction of commercial kits in the mid-1990s. While 15 to 23 STR loci normally give definitive results in simple kinship testing, additional loci are sometimes required to resolve complex cases. The SureID 2...

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Autores principales: Alsafiah, Hussain M., Aljanabi, Ali A., Hadi, Sibte, Alturayeif, Saleh S., Goodwin, William
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856129/
https://www.ncbi.nlm.nih.gov/pubmed/31727926
http://dx.doi.org/10.1038/s41598-019-52838-7
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author Alsafiah, Hussain M.
Aljanabi, Ali A.
Hadi, Sibte
Alturayeif, Saleh S.
Goodwin, William
author_facet Alsafiah, Hussain M.
Aljanabi, Ali A.
Hadi, Sibte
Alturayeif, Saleh S.
Goodwin, William
author_sort Alsafiah, Hussain M.
collection PubMed
description Short tandem repeat (STR) profiling has been routinely used in kinship testing since the introduction of commercial kits in the mid-1990s. While 15 to 23 STR loci normally give definitive results in simple kinship testing, additional loci are sometimes required to resolve complex cases. The SureID 23comp Human Identification Kit, recently released by Health Gene Technologies (China), multiplexes amelogenin and 22 autosomal STRs, 17 of which are non-CODIS STRs. This enables the profiling of 38–40 loci when used in conjunction with widely used commercial kits. In this study, the kit was evaluated for kinship applications as a supplementary STR kit following the minimum criteria for validation recommended by the European Network of Forensic Science Institutes (ENFSI) and the Scientific Working Group on DNA Analysis Methods (SWGDAM) using 500 samples. Performance was comparable with other commercial kits demonstrating: repeatability and reproducibility; precision (maximum s.d. 0.1048 nt); accuracy, all alleles were within ±0.41 nt compared to the actual sizes; heterozygous peak balances at all loci >68%; stutter ratios ranged from 3.8% to 16.15%; full profiles were generated with 125 pg DNA (95.12% of alleles at 62 pg),; and we found 100% concordance over 5 common STRs with the GlobalFiler kit.
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spelling pubmed-68561292019-11-19 An evaluation of the SureID 23comp Human Identification Kit for kinship testing Alsafiah, Hussain M. Aljanabi, Ali A. Hadi, Sibte Alturayeif, Saleh S. Goodwin, William Sci Rep Article Short tandem repeat (STR) profiling has been routinely used in kinship testing since the introduction of commercial kits in the mid-1990s. While 15 to 23 STR loci normally give definitive results in simple kinship testing, additional loci are sometimes required to resolve complex cases. The SureID 23comp Human Identification Kit, recently released by Health Gene Technologies (China), multiplexes amelogenin and 22 autosomal STRs, 17 of which are non-CODIS STRs. This enables the profiling of 38–40 loci when used in conjunction with widely used commercial kits. In this study, the kit was evaluated for kinship applications as a supplementary STR kit following the minimum criteria for validation recommended by the European Network of Forensic Science Institutes (ENFSI) and the Scientific Working Group on DNA Analysis Methods (SWGDAM) using 500 samples. Performance was comparable with other commercial kits demonstrating: repeatability and reproducibility; precision (maximum s.d. 0.1048 nt); accuracy, all alleles were within ±0.41 nt compared to the actual sizes; heterozygous peak balances at all loci >68%; stutter ratios ranged from 3.8% to 16.15%; full profiles were generated with 125 pg DNA (95.12% of alleles at 62 pg),; and we found 100% concordance over 5 common STRs with the GlobalFiler kit. Nature Publishing Group UK 2019-11-14 /pmc/articles/PMC6856129/ /pubmed/31727926 http://dx.doi.org/10.1038/s41598-019-52838-7 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Alsafiah, Hussain M.
Aljanabi, Ali A.
Hadi, Sibte
Alturayeif, Saleh S.
Goodwin, William
An evaluation of the SureID 23comp Human Identification Kit for kinship testing
title An evaluation of the SureID 23comp Human Identification Kit for kinship testing
title_full An evaluation of the SureID 23comp Human Identification Kit for kinship testing
title_fullStr An evaluation of the SureID 23comp Human Identification Kit for kinship testing
title_full_unstemmed An evaluation of the SureID 23comp Human Identification Kit for kinship testing
title_short An evaluation of the SureID 23comp Human Identification Kit for kinship testing
title_sort evaluation of the sureid 23comp human identification kit for kinship testing
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856129/
https://www.ncbi.nlm.nih.gov/pubmed/31727926
http://dx.doi.org/10.1038/s41598-019-52838-7
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