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Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers

PREMISE: Spore‐bearing plants are capable of dispersing very long distances. However, it is not known if gene flow can prevent genetic divergence in widely distributed taxa. Here we address this issue, and examine systematic relationships at a global geographic scale for the fern genus Pteridium. ME...

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Autores principales: Wolf, Paul G., Rowe, Carol A., Kinosian, Sylvia P., Der, Joshua P., Lockhart, Peter J., Shepherd, Lara D., McLenachan, Patricia A., Thomson, John A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856829/
https://www.ncbi.nlm.nih.gov/pubmed/31545874
http://dx.doi.org/10.1002/ajb2.1365
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author Wolf, Paul G.
Rowe, Carol A.
Kinosian, Sylvia P.
Der, Joshua P.
Lockhart, Peter J.
Shepherd, Lara D.
McLenachan, Patricia A.
Thomson, John A.
author_facet Wolf, Paul G.
Rowe, Carol A.
Kinosian, Sylvia P.
Der, Joshua P.
Lockhart, Peter J.
Shepherd, Lara D.
McLenachan, Patricia A.
Thomson, John A.
author_sort Wolf, Paul G.
collection PubMed
description PREMISE: Spore‐bearing plants are capable of dispersing very long distances. However, it is not known if gene flow can prevent genetic divergence in widely distributed taxa. Here we address this issue, and examine systematic relationships at a global geographic scale for the fern genus Pteridium. METHODS: We sampled plants from 100 localities worldwide, and generated nucleotide data from four nuclear genes and two plastid regions. We also examined 2801 single nucleotide polymorphisms detected by a restriction site‐associated DNA approach. RESULTS: We found evidence for two distinct diploid species and two allotetraploids between them. The “northern” species (Pteridium aquilinum) has distinct groups at the continental scale (Europe, Asia, Africa, and North America). The northern European subspecies pinetorum appears to involve admixture among all of these. A sample from the Hawaiian Islands contained elements of both North American and Asian P. aquilinum. The “southern” species, P. esculentum, shows little genetic differentiation between South American and Australian samples. Components of African genotypes are detected on all continents. CONCLUSIONS: We find evidence of distinct continental‐scale genetic differentiation in Pteridium. However, on top of this is a clear signal of recent hybridization. Thus, spore‐bearing plants are clearly capable of extensive long‐distance gene flow; yet appear to have differentiated genetically at the continental scale. Either gene flow in the past was at a reduced level, or vicariance is possible even in the face of long‐distance gene flow.
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spelling pubmed-68568292019-11-21 Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers Wolf, Paul G. Rowe, Carol A. Kinosian, Sylvia P. Der, Joshua P. Lockhart, Peter J. Shepherd, Lara D. McLenachan, Patricia A. Thomson, John A. Am J Bot Research Articles PREMISE: Spore‐bearing plants are capable of dispersing very long distances. However, it is not known if gene flow can prevent genetic divergence in widely distributed taxa. Here we address this issue, and examine systematic relationships at a global geographic scale for the fern genus Pteridium. METHODS: We sampled plants from 100 localities worldwide, and generated nucleotide data from four nuclear genes and two plastid regions. We also examined 2801 single nucleotide polymorphisms detected by a restriction site‐associated DNA approach. RESULTS: We found evidence for two distinct diploid species and two allotetraploids between them. The “northern” species (Pteridium aquilinum) has distinct groups at the continental scale (Europe, Asia, Africa, and North America). The northern European subspecies pinetorum appears to involve admixture among all of these. A sample from the Hawaiian Islands contained elements of both North American and Asian P. aquilinum. The “southern” species, P. esculentum, shows little genetic differentiation between South American and Australian samples. Components of African genotypes are detected on all continents. CONCLUSIONS: We find evidence of distinct continental‐scale genetic differentiation in Pteridium. However, on top of this is a clear signal of recent hybridization. Thus, spore‐bearing plants are clearly capable of extensive long‐distance gene flow; yet appear to have differentiated genetically at the continental scale. Either gene flow in the past was at a reduced level, or vicariance is possible even in the face of long‐distance gene flow. John Wiley and Sons Inc. 2019-09-23 2019-10 /pmc/articles/PMC6856829/ /pubmed/31545874 http://dx.doi.org/10.1002/ajb2.1365 Text en © 2019 The Authors. American Journal of Botany published by Wiley Periodicals, Inc. on behalf of Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.
spellingShingle Research Articles
Wolf, Paul G.
Rowe, Carol A.
Kinosian, Sylvia P.
Der, Joshua P.
Lockhart, Peter J.
Shepherd, Lara D.
McLenachan, Patricia A.
Thomson, John A.
Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers
title Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers
title_full Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers
title_fullStr Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers
title_full_unstemmed Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers
title_short Worldwide relationships in the fern genus Pteridium (bracken) based on nuclear genome markers
title_sort worldwide relationships in the fern genus pteridium (bracken) based on nuclear genome markers
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856829/
https://www.ncbi.nlm.nih.gov/pubmed/31545874
http://dx.doi.org/10.1002/ajb2.1365
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