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Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis

Tests for disease often produce a continuous measure, such as the concentration of some biomarker in a blood sample. In clinical practice, a threshold C is selected such that results, say, greater than C are declared positive and those less than C negative. Measures of test accuracy such as sensitiv...

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Autores principales: Jones, Hayley E., Gatsonsis, Constantine A., Trikalinos, Thomas A., Welton, Nicky J., Ades, A.E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856843/
https://www.ncbi.nlm.nih.gov/pubmed/31571244
http://dx.doi.org/10.1002/sim.8301
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author Jones, Hayley E.
Gatsonsis, Constantine A.
Trikalinos, Thomas A.
Welton, Nicky J.
Ades, A.E.
author_facet Jones, Hayley E.
Gatsonsis, Constantine A.
Trikalinos, Thomas A.
Welton, Nicky J.
Ades, A.E.
author_sort Jones, Hayley E.
collection PubMed
description Tests for disease often produce a continuous measure, such as the concentration of some biomarker in a blood sample. In clinical practice, a threshold C is selected such that results, say, greater than C are declared positive and those less than C negative. Measures of test accuracy such as sensitivity and specificity depend crucially on C, and the optimal value of this threshold is usually a key question for clinical practice. Standard methods for meta‐analysis of test accuracy (i) do not provide summary estimates of accuracy at each threshold, precluding selection of the optimal threshold, and furthermore, (ii) do not make use of all available data. We describe a multinomial meta‐analysis model that can take any number of pairs of sensitivity and specificity from each study and explicitly quantifies how accuracy depends on C. Our model assumes that some prespecified or Box‐Cox transformation of test results in the diseased and disease‐free populations has a logistic distribution. The Box‐Cox transformation parameter can be estimated from the data, allowing for a flexible range of underlying distributions. We parameterise in terms of the means and scale parameters of the two logistic distributions. In addition to credible intervals for the pooled sensitivity and specificity across all thresholds, we produce prediction intervals, allowing for between‐study heterogeneity in all parameters. We demonstrate the model using two case study meta‐analyses, examining the accuracy of tests for acute heart failure and preeclampsia. We show how the model can be extended to explore reasons for heterogeneity using study‐level covariates.
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spelling pubmed-68568432019-11-21 Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis Jones, Hayley E. Gatsonsis, Constantine A. Trikalinos, Thomas A. Welton, Nicky J. Ades, A.E. Stat Med Research Articles Tests for disease often produce a continuous measure, such as the concentration of some biomarker in a blood sample. In clinical practice, a threshold C is selected such that results, say, greater than C are declared positive and those less than C negative. Measures of test accuracy such as sensitivity and specificity depend crucially on C, and the optimal value of this threshold is usually a key question for clinical practice. Standard methods for meta‐analysis of test accuracy (i) do not provide summary estimates of accuracy at each threshold, precluding selection of the optimal threshold, and furthermore, (ii) do not make use of all available data. We describe a multinomial meta‐analysis model that can take any number of pairs of sensitivity and specificity from each study and explicitly quantifies how accuracy depends on C. Our model assumes that some prespecified or Box‐Cox transformation of test results in the diseased and disease‐free populations has a logistic distribution. The Box‐Cox transformation parameter can be estimated from the data, allowing for a flexible range of underlying distributions. We parameterise in terms of the means and scale parameters of the two logistic distributions. In addition to credible intervals for the pooled sensitivity and specificity across all thresholds, we produce prediction intervals, allowing for between‐study heterogeneity in all parameters. We demonstrate the model using two case study meta‐analyses, examining the accuracy of tests for acute heart failure and preeclampsia. We show how the model can be extended to explore reasons for heterogeneity using study‐level covariates. John Wiley and Sons Inc. 2019-09-30 2019-10-30 /pmc/articles/PMC6856843/ /pubmed/31571244 http://dx.doi.org/10.1002/sim.8301 Text en © 2019 The Authors. Statistics in Medicine Published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Jones, Hayley E.
Gatsonsis, Constantine A.
Trikalinos, Thomas A.
Welton, Nicky J.
Ades, A.E.
Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis
title Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis
title_full Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis
title_fullStr Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis
title_full_unstemmed Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis
title_short Quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis
title_sort quantifying how diagnostic test accuracy depends on threshold in a meta‐analysis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6856843/
https://www.ncbi.nlm.nih.gov/pubmed/31571244
http://dx.doi.org/10.1002/sim.8301
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