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Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans
BACKGROUND: Aminopeptidases play important roles in various biological processes in nematodes including growth, development and reproduction. Although the aminopeptidases have been shown to regulate reproduction in Caenorhabditis elegans (C. elegans), the role of aminopeptidases in development and a...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6857582/ https://www.ncbi.nlm.nih.gov/pubmed/31737443 http://dx.doi.org/10.7717/peerj.7944 |
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author | Su, Shanchun Pan, Baoliang Hu, Yanxin Wang, Ming |
author_facet | Su, Shanchun Pan, Baoliang Hu, Yanxin Wang, Ming |
author_sort | Su, Shanchun |
collection | PubMed |
description | BACKGROUND: Aminopeptidases play important roles in various biological processes in nematodes including growth, development and reproduction. Although the aminopeptidases have been shown to regulate reproduction in Caenorhabditis elegans (C. elegans), the role of aminopeptidases in development and aging has not been reported. This study focused on the function of aminopeptidase AlaNyl aminopeptidase 1 (ANP-1) on development in C. elegans. METHODS: In the present study, we reported the identification of ANP-1 in C. elegans along with sequence analysis and its functional expression and characterization. The phenotype changes were observed when anp-1 mutated. Then, differential expression genes (DEGs) between wild type strain (N2) and anp-1 deletion strain (RB804) were identified using transcriptome sequencing method. Finally, DEGs were verified by qRT-PCR assay. RESULTS: Our observations suggested that anp-1 mutation induced small body size in the L4/young adult stage of C. elegans, however, there was no difference between N2 and RB804 in adult stage. Moreover, deletion of anp-1 resulted in shortening lifespan and laying fewer eggs. DEGs (184 genes) were observed between N2 groups and RB804 groups by transcriptome sequencing. According to GO annotations and KEGG enrichment analysis, these DEGs play vital roles in development regulation in C. elegans. These data demonstrate ANP-1 participates in development and aging of C. elegans and will considerably contribute to the existing knowledge of aminopeptidase function in C. elegans. |
format | Online Article Text |
id | pubmed-6857582 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-68575822019-11-15 Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans Su, Shanchun Pan, Baoliang Hu, Yanxin Wang, Ming PeerJ Molecular Biology BACKGROUND: Aminopeptidases play important roles in various biological processes in nematodes including growth, development and reproduction. Although the aminopeptidases have been shown to regulate reproduction in Caenorhabditis elegans (C. elegans), the role of aminopeptidases in development and aging has not been reported. This study focused on the function of aminopeptidase AlaNyl aminopeptidase 1 (ANP-1) on development in C. elegans. METHODS: In the present study, we reported the identification of ANP-1 in C. elegans along with sequence analysis and its functional expression and characterization. The phenotype changes were observed when anp-1 mutated. Then, differential expression genes (DEGs) between wild type strain (N2) and anp-1 deletion strain (RB804) were identified using transcriptome sequencing method. Finally, DEGs were verified by qRT-PCR assay. RESULTS: Our observations suggested that anp-1 mutation induced small body size in the L4/young adult stage of C. elegans, however, there was no difference between N2 and RB804 in adult stage. Moreover, deletion of anp-1 resulted in shortening lifespan and laying fewer eggs. DEGs (184 genes) were observed between N2 groups and RB804 groups by transcriptome sequencing. According to GO annotations and KEGG enrichment analysis, these DEGs play vital roles in development regulation in C. elegans. These data demonstrate ANP-1 participates in development and aging of C. elegans and will considerably contribute to the existing knowledge of aminopeptidase function in C. elegans. PeerJ Inc. 2019-11-12 /pmc/articles/PMC6857582/ /pubmed/31737443 http://dx.doi.org/10.7717/peerj.7944 Text en © 2019 Su et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Molecular Biology Su, Shanchun Pan, Baoliang Hu, Yanxin Wang, Ming Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans |
title | Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans |
title_full | Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans |
title_fullStr | Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans |
title_full_unstemmed | Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans |
title_short | Characterization of aminopeptidase encoding gene anp-1 and its association with development in Caenorhabditis elegans |
title_sort | characterization of aminopeptidase encoding gene anp-1 and its association with development in caenorhabditis elegans |
topic | Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6857582/ https://www.ncbi.nlm.nih.gov/pubmed/31737443 http://dx.doi.org/10.7717/peerj.7944 |
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