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Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients
KRAS is an independent negative predictor for anti-epidermal growth factor receptor (anti-EGFR) treatment in colorectal cancers (CRCs). However, 30% to 50% of CRC patients are KRAS-positive and do not benefit from anti-EGFR therapy. In this study, we investigated the mutational features and clinical...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6858340/ https://www.ncbi.nlm.nih.gov/pubmed/31729406 http://dx.doi.org/10.1038/s41598-019-53039-y |
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author | Dong, Zhouhuan Kong, Linghong Wan, Zhiyi Zhu, Fengwei Zhong, Mei Lv, Yali Zhao, Po Shi, Huaiyin |
author_facet | Dong, Zhouhuan Kong, Linghong Wan, Zhiyi Zhu, Fengwei Zhong, Mei Lv, Yali Zhao, Po Shi, Huaiyin |
author_sort | Dong, Zhouhuan |
collection | PubMed |
description | KRAS is an independent negative predictor for anti-epidermal growth factor receptor (anti-EGFR) treatment in colorectal cancers (CRCs). However, 30% to 50% of CRC patients are KRAS-positive and do not benefit from anti-EGFR therapy. In this study, we investigated the mutational features and clinical significance of KRAS-positive Chinese CRC patients. A total of 139 Chinese CRC patients who received clinical KRAS testing (Sanger sequencing) were examined by immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH). Fifty KRAS-positive specimens were further detected by next-generation sequencing (NGS). The most prevalent mutation in KRAS was G12D (46%), followed by G12V (20%), and G13D (18%). In addition to KRAS, 72 unique alterations in another 12 genes were also detected. The most common mutated genes were TP53 (62%), APC (46%), and PIK3CA (22%). The proportion of HER2 amplifications in KRAS-positive CRC patients was 4.4%, which was lower than that in KRAS -negative CRC patients (14.3%). No relationship was found between HER2 amplification and KRAS status (p = 0.052). However, the odds ratio is very low (0.279). In addition, these gene mutations were not significantly associated with age, sex, tumor size, lymph node metastasis, mismatch repair–deficient, or tumor differentiation. However, TP53 mutations were more prevalent in colon cancer with KRAS mutations than in rectal cancer (75.0% vs 28.6%, respectively, p = 0.004). The negative predictive value of the IHC analysis for predicting HER2 amplification reached to 98.39%, while the positive predictive value reached only 50%. Overall, the mutation profiling of Chinese CRC patients with KRAS mutations is different from that of Western CRC patients. Our results will help us to understand the molecular features of Chinese CRC patients. |
format | Online Article Text |
id | pubmed-6858340 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-68583402019-11-27 Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients Dong, Zhouhuan Kong, Linghong Wan, Zhiyi Zhu, Fengwei Zhong, Mei Lv, Yali Zhao, Po Shi, Huaiyin Sci Rep Article KRAS is an independent negative predictor for anti-epidermal growth factor receptor (anti-EGFR) treatment in colorectal cancers (CRCs). However, 30% to 50% of CRC patients are KRAS-positive and do not benefit from anti-EGFR therapy. In this study, we investigated the mutational features and clinical significance of KRAS-positive Chinese CRC patients. A total of 139 Chinese CRC patients who received clinical KRAS testing (Sanger sequencing) were examined by immunohistochemistry (IHC) and fluorescence in situ hybridization (FISH). Fifty KRAS-positive specimens were further detected by next-generation sequencing (NGS). The most prevalent mutation in KRAS was G12D (46%), followed by G12V (20%), and G13D (18%). In addition to KRAS, 72 unique alterations in another 12 genes were also detected. The most common mutated genes were TP53 (62%), APC (46%), and PIK3CA (22%). The proportion of HER2 amplifications in KRAS-positive CRC patients was 4.4%, which was lower than that in KRAS -negative CRC patients (14.3%). No relationship was found between HER2 amplification and KRAS status (p = 0.052). However, the odds ratio is very low (0.279). In addition, these gene mutations were not significantly associated with age, sex, tumor size, lymph node metastasis, mismatch repair–deficient, or tumor differentiation. However, TP53 mutations were more prevalent in colon cancer with KRAS mutations than in rectal cancer (75.0% vs 28.6%, respectively, p = 0.004). The negative predictive value of the IHC analysis for predicting HER2 amplification reached to 98.39%, while the positive predictive value reached only 50%. Overall, the mutation profiling of Chinese CRC patients with KRAS mutations is different from that of Western CRC patients. Our results will help us to understand the molecular features of Chinese CRC patients. Nature Publishing Group UK 2019-11-15 /pmc/articles/PMC6858340/ /pubmed/31729406 http://dx.doi.org/10.1038/s41598-019-53039-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Dong, Zhouhuan Kong, Linghong Wan, Zhiyi Zhu, Fengwei Zhong, Mei Lv, Yali Zhao, Po Shi, Huaiyin Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients |
title | Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients |
title_full | Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients |
title_fullStr | Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients |
title_full_unstemmed | Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients |
title_short | Somatic mutation profiling and HER2 status in KRAS-positive Chinese colorectal cancer patients |
title_sort | somatic mutation profiling and her2 status in kras-positive chinese colorectal cancer patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6858340/ https://www.ncbi.nlm.nih.gov/pubmed/31729406 http://dx.doi.org/10.1038/s41598-019-53039-y |
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